Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC127391.1-201ENST00000411737 98 ntBASIC4.35□□□□□ -1.71
PROM1O43490 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.35□□□□□ -1.71
PROM1O43490 NUP35P2-201ENST00000416748 943 ntBASIC4.35□□□□□ -1.71
PROM1O43490 Z74021.1-201ENST00000423610 407 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC012498.1-201ENST00000424037 437 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC234779.1-201ENST00000425910 285 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.35□□□□□ -1.71
PROM1O43490 AL359265.2-201ENST00000434367 631 ntBASIC4.35□□□□□ -1.71
PROM1O43490 HSPE1P28-201ENST00000443139 211 ntBASIC4.35□□□□□ -1.71
PROM1O43490 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.35□□□□□ -1.71
PROM1O43490 FAM103A2P-201ENST00000444122 354 ntBASIC4.35□□□□□ -1.71
PROM1O43490 RPS26P56-201ENST00000444468 240 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC005297.2-201ENST00000450430 606 ntBASIC4.35□□□□□ -1.71
PROM1O43490 SNORD108-201ENST00000459332 71 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC010326.1-201ENST00000462726 602 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.35□□□□□ -1.71
PROM1O43490 AC087879.1-201ENST00000474343 374 ntBASIC4.35□□□□□ -1.71
PROM1O43490 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 AC034222.1-201ENST00000494052 532 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.35□□□□□ -1.71
PROM1O43490 RN7SKP234-201ENST00000517173 224 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.35□□□□□ -1.71
PROM1O43490 AC022616.6-201ENST00000520479 119 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.35□□□□□ -1.71
PROM1O43490 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PROM1O43490 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.35□□□□□ -1.71
PROM1O43490 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.35□□□□□ -1.71
PROM1O43490 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.35□□□□□ -1.71
PROM1O43490 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 AC008752.3-201ENST00000588113 712 ntBASIC4.35□□□□□ -1.71
PROM1O43490 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 AC055876.5-201ENST00000605667 259 ntBASIC4.35□□□□□ -1.71
PROM1O43490 RNA5SP108-201ENST00000605921 117 ntBASIC4.35□□□□□ -1.71
PROM1O43490 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 AL020991.1-201ENST00000612314 373 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AL133173.2-201ENST00000614270 90 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC139792.3-201ENST00000623525 224 ntBASIC4.35□□□□□ -1.71
PROM1O43490 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 KPNA2P2-201ENST00000419546 1489 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC024560.2-201ENST00000507981 1497 ntBASIC4.35□□□□□ -1.71
PROM1O43490 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 AC108467.2-201ENST00000617640 1597 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AL049780.3-201ENST00000624612 1583 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AC010300.1-201ENST00000600671 5134 ntBASIC4.35□□□□□ -1.71
PROM1O43490 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 AL672167.1-203ENST00000641299 2975 ntBASIC4.35□□□□□ -1.71
PROM1O43490 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PROM1O43490 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.34□□□□□ -1.71
PROM1O43490 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.34□□□□□ -1.71
PROM1O43490 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.34□□□□□ -1.71
PROM1O43490 Y_RNA.46-201ENST00000362695 102 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RNU6-343P-201ENST00000364709 104 ntBASIC4.34□□□□□ -1.71
PROM1O43490 SNORA71.2-201ENST00000364941 134 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RNU6-1293P-201ENST00000384077 107 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RNU6-483P-201ENST00000384088 108 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AL049697.2-201ENST00000403708 294 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RPL7P25-201ENST00000404151 721 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RNU2-8P-201ENST00000410727 190 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RN7SKP106-201ENST00000410832 272 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AL359704.1-201ENST00000411586 781 ntBASIC4.34□□□□□ -1.71
PROM1O43490 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 AC004987.3-201ENST00000413879 771 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RPL17P36-201ENST00000420302 549 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AC133104.1-201ENST00000429100 218 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.34□□□□□ -1.71
PROM1O43490 USP9YP8-201ENST00000441913 500 ntBASIC4.34□□□□□ -1.71
PROM1O43490 PPIAP3-201ENST00000450588 505 ntBASIC4.34□□□□□ -1.71
PROM1O43490 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.34□□□□□ -1.71
PROM1O43490 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.34□□□□□ -1.71
PROM1O43490 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.34□□□□□ -1.71
PROM1O43490 RPL23AP65-201ENST00000475608 468 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RPL35P6-201ENST00000490024 372 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AC005726.1-201ENST00000494679 427 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RPS4XP18-201ENST00000495480 763 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.34□□□□□ -1.71
PROM1O43490 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.34□□□□□ -1.71
PROM1O43490 RNU6-358P-201ENST00000516564 75 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RN7SKP92-201ENST00000517266 244 ntBASIC4.34□□□□□ -1.71
PROM1O43490 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.34□□□□□ -1.71
PROM1O43490 AC009643.1-201ENST00000532030 391 ntBASIC4.34□□□□□ -1.71
PROM1O43490 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.34□□□□□ -1.71
PROM1O43490 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PROM1O43490 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.34□□□□□ -1.71
PROM1O43490 AC025678.1-201ENST00000567861 338 ntBASIC4.34□□□□□ -1.71
PROM1O43490 RN7SL690P-201ENST00000582087 240 ntBASIC4.34□□□□□ -1.71
PROM1O43490 FGF7P1-201ENST00000582820 288 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms