Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNA5SP372-201ENST00000390836 115 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 SNORD115.1-201ENST00000391109 76 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC009237.10-201ENST00000414112 510 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC233981.1-201ENST00000423224 461 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AL445669.1-201ENST00000426743 755 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 KCTD9P3-201ENST00000434597 1169 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.31□□□□□ -1.56
SRGAP3O43295 TAAR7P-201ENST00000436141 242 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 EEF1A1P1-201ENST00000447052 739 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 TPT1P12-201ENST00000448968 492 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 RPL10P17-201ENST00000453852 316 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.31□□□□□ -1.56
SRGAP3O43295 RNU7-136P-201ENST00000458819 69 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC023194.1-201ENST00000493084 308 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 KLRA1P-201ENST00000503499 986 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC010486.1-201ENST00000511793 424 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC108471.1-201ENST00000513977 287 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 RNA5SP73-201ENST00000516744 108 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC100770.1-201ENST00000532310 322 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC078814.3-201ENST00000553036 491 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC015917.1-201ENST00000579654 510 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.31□□□□□ -1.56
SRGAP3O43295 AC011477.5-201ENST00000586571 259 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC010928.3-201ENST00000587712 541 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC013553.2-201ENST00000604244 589 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 FAM27D1-201ENST00000612308 341 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC009237.17-201ENST00000618111 748 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 AC068722.2-201ENST00000618734 544 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 YWHAEP7-203ENST00000622054 312 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SRGAP3O43295 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.31□□□□□ -1.56
SRGAP3O43295 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.3□□□□□ -1.56
SRGAP3O43295 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.3□□□□□ -1.56
SRGAP3O43295 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SRGAP3O43295 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 AL512646.1-201ENST00000269395 1077 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC067945.1-201ENST00000342609 618 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 MIR383-201ENST00000362257 73 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RNU6-845P-201ENST00000362578 103 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RNY3P3-201ENST00000363816 102 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RNU6-1322P-201ENST00000364309 107 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 Y_RNA.381-201ENST00000365666 102 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RNU6-1227P-201ENST00000383981 107 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRGAP3O43295 RPS20P2-201ENST00000402520 389 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RNU6-908P-201ENST00000410160 94 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RNA5SP146-201ENST00000410743 123 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC234781.4-201ENST00000419384 244 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.3□□□□□ -1.56
SRGAP3O43295 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC005534.2-201ENST00000431047 433 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 NUTF2P3-201ENST00000448540 384 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC005008.1-201ENST00000456151 612 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.3□□□□□ -1.56
SRGAP3O43295 RPL21P71-201ENST00000465598 459 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 RN7SL860P-201ENST00000473738 223 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AC034159.1-201ENST00000513885 583 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.3□□□□□ -1.56
SRGAP3O43295 PHBP17-201ENST00000528576 541 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AP003181.2-201ENST00000528941 181 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AP000942.4-201ENST00000604811 241 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AL162730.1-201ENST00000605734 292 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.3□□□□□ -1.56
SRGAP3O43295 RMST_3.1-201ENST00000611651 109 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SRGAP3O43295 AP006248.2-201ENST00000623309 592 ntBASIC5.3□□□□□ -1.56
SRGAP3O43295 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SRGAP3O43295 AL645937.1-201ENST00000641739 1652 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms