Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
MSH4O15457 AIMP1P1-201ENST00000418670 937 ntBASIC3.28□□□□□ -1.88
MSH4O15457 MTND2P16-201ENST00000419987 799 ntBASIC3.28□□□□□ -1.88
MSH4O15457 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.28□□□□□ -1.88
MSH4O15457 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.28□□□□□ -1.88
MSH4O15457 RPS6P14-201ENST00000425165 719 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AL035410.1-201ENST00000427409 427 ntBASIC3.28□□□□□ -1.88
MSH4O15457 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.28□□□□□ -1.88
MSH4O15457 CFTRP1-201ENST00000456646 183 ntBASIC3.28□□□□□ -1.88
MSH4O15457 snoU13.3-201ENST00000459441 104 ntBASIC3.28□□□□□ -1.88
MSH4O15457 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
MSH4O15457 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.28□□□□□ -1.88
MSH4O15457 RPL23AP44-201ENST00000482216 473 ntBASIC3.28□□□□□ -1.88
MSH4O15457 RPL31P13-201ENST00000484151 370 ntBASIC3.28□□□□□ -1.88
MSH4O15457 HMGB1P38-201ENST00000490557 577 ntBASIC3.28□□□□□ -1.88
MSH4O15457 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.28□□□□□ -1.88
MSH4O15457 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC104417.1-201ENST00000523974 751 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.28□□□□□ -1.88
MSH4O15457 ZNF192P1-203ENST00000565888 810 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC093519.1-201ENST00000566109 298 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC090079.2-201ENST00000575289 768 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.28□□□□□ -1.88
MSH4O15457 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
MSH4O15457 AC006254.3-201ENST00000603353 884 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC124016.2-201ENST00000610058 665 ntBASIC3.28□□□□□ -1.88
MSH4O15457 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MSH4O15457 AC007275.1-201ENST00000621243 671 ntBASIC3.28□□□□□ -1.88
MSH4O15457 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.28□□□□□ -1.88
MSH4O15457 AP003476.1-201ENST00000623984 516 ntBASIC3.28□□□□□ -1.88
MSH4O15457 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MSH4O15457 U6.98-201ENST00000637157 84 ntBASIC3.28□□□□□ -1.88
MSH4O15457 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.28□□□□□ -1.88
MSH4O15457 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.28□□□□□ -1.88
MSH4O15457 AC116096.1-201ENST00000566804 2314 ntBASIC3.28□□□□□ -1.88
MSH4O15457 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
MSH4O15457 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
MSH4O15457 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 AC096644.4-201ENST00000563417 2912 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 AP003122.5-201ENST00000527668 3766 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AF127577.6-201ENST00000623352 2191 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC130650.2-201ENST00000618736 2403 ntBASIC3.27□□□□□ -1.89
MSH4O15457 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
MSH4O15457 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
MSH4O15457 RNU6-600P-201ENST00000362524 99 ntBASIC3.27□□□□□ -1.89
MSH4O15457 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.27□□□□□ -1.89
MSH4O15457 RNU6-851P-201ENST00000384565 107 ntBASIC3.27□□□□□ -1.89
MSH4O15457 MIR607-201ENST00000385241 96 ntBASIC3.27□□□□□ -1.89
MSH4O15457 RNU6-837P-201ENST00000391056 108 ntBASIC3.27□□□□□ -1.89
MSH4O15457 HSPE1P26-201ENST00000405341 275 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AL138880.1-201ENST00000405824 642 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AL133264.1-201ENST00000407157 562 ntBASIC3.27□□□□□ -1.89
MSH4O15457 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 AL136133.1-201ENST00000413694 376 ntBASIC3.27□□□□□ -1.89
MSH4O15457 TOMM22P1-201ENST00000418578 312 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.27□□□□□ -1.89
MSH4O15457 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.27□□□□□ -1.89
MSH4O15457 AC092634.2-201ENST00000428146 1010 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC005345.1-201ENST00000431868 217 ntBASIC3.27□□□□□ -1.89
MSH4O15457 FTH1P1-201ENST00000437933 532 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC107083.1-201ENST00000439643 279 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
MSH4O15457 RPL21P41-201ENST00000459863 264 ntBASIC3.27□□□□□ -1.89
MSH4O15457 OR5H5P-201ENST00000503164 928 ntBASIC3.27□□□□□ -1.89
MSH4O15457 MTCYBP37-201ENST00000510642 1133 ntBASIC3.27□□□□□ -1.89
MSH4O15457 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.27□□□□□ -1.89
MSH4O15457 ARL2BPP5-201ENST00000523141 481 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AP004371.1-201ENST00000525240 214 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC019227.1-201ENST00000526902 510 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AP003973.1-201ENST00000604639 691 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AP002802.2-201ENST00000605877 235 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AL512506.2-201ENST00000624472 458 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
MSH4O15457 AC080188.3-201ENST00000624842 748 ntBASIC3.27□□□□□ -1.89
MSH4O15457 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.27□□□□□ -1.89
MSH4O15457 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.27□□□□□ -1.89
MSH4O15457 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 AC093831.2-201ENST00000624393 3427 ntBASIC3.27□□□□□ -1.89
MSH4O15457 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MSH4O15457 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.26□□□□□ -1.89
MSH4O15457 ZNF542P-204ENST00000482727 1305 ntBASIC3.26□□□□□ -1.89
MSH4O15457 SNORA18.3-201ENST00000384122 132 ntBASIC3.26□□□□□ -1.89
MSH4O15457 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
MSH4O15457 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.26□□□□□ -1.89
MSH4O15457 RPL31P54-201ENST00000429803 370 ntBASIC3.26□□□□□ -1.89
MSH4O15457 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.26□□□□□ -1.89
MSH4O15457 RPL23AP16-201ENST00000441715 421 ntBASIC3.26□□□□□ -1.89
MSH4O15457 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.26□□□□□ -1.89
MSH4O15457 AC004022.1-201ENST00000447766 1066 ntBASIC3.26□□□□□ -1.89
MSH4O15457 MRPL42P4-201ENST00000453267 443 ntBASIC3.26□□□□□ -1.89
MSH4O15457 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.26□□□□□ -1.89
MSH4O15457 TRBV26-201ENST00000456572 344 ntBASIC3.26□□□□□ -1.89
MSH4O15457 MTCO3P2-201ENST00000457365 171 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms