Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC244517.12-201ENST00000623581 663 ntBASIC3.46□□□□□ -1.86
CHD1O14646 CU459211.1-201ENST00000635667 749 ntBASIC3.46□□□□□ -1.86
CHD1O14646 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD1O14646 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD1O14646 FRG1BP-201ENST00000278882 761 ntBASIC3.45□□□□□ -1.86
CHD1O14646 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD1O14646 AP001207.1-201ENST00000524051 481 ntBASIC3.45□□□□□ -1.86
CHD1O14646 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.45□□□□□ -1.86
CHD1O14646 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHD1O14646 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CHD1O14646 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD1O14646 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD1O14646 TRIM60P18-201ENST00000441518 828 ntBASIC3.44□□□□□ -1.86
CHD1O14646 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.44□□□□□ -1.86
CHD1O14646 AC140059.1-201ENST00000489238 361 ntBASIC3.44□□□□□ -1.86
CHD1O14646 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.44□□□□□ -1.86
CHD1O14646 AC025881.1-201ENST00000518851 512 ntBASIC3.44□□□□□ -1.86
CHD1O14646 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.44□□□□□ -1.86
CHD1O14646 AL589994.2-201ENST00000621124 579 ntBASIC3.44□□□□□ -1.86
CHD1O14646 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHD1O14646 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHD1O14646 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD1O14646 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CHD1O14646 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.44□□□□□ -1.86
CHD1O14646 RPL23AP16-201ENST00000441715 421 ntBASIC3.44□□□□□ -1.86
CHD1O14646 COX6CP2-201ENST00000444980 225 ntBASIC3.44□□□□□ -1.86
CHD1O14646 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.44□□□□□ -1.86
CHD1O14646 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.44□□□□□ -1.86
CHD1O14646 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.44□□□□□ -1.86
CHD1O14646 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHD1O14646 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.43□□□□□ -1.86
CHD1O14646 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD1O14646 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD1O14646 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD1O14646 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CHD1O14646 OR5H15-201ENST00000383696 930 ntBASIC3.43□□□□□ -1.86
CHD1O14646 SNORA40.18-201ENST00000391200 128 ntBASIC3.43□□□□□ -1.86
CHD1O14646 RNA5SP129-201ENST00000410276 118 ntBASIC3.43□□□□□ -1.86
CHD1O14646 AL513175.2-201ENST00000422071 443 ntBASIC3.43□□□□□ -1.86
CHD1O14646 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.43□□□□□ -1.86
CHD1O14646 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.43□□□□□ -1.86
CHD1O14646 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.43□□□□□ -1.86
CHD1O14646 RNA5SP490-201ENST00000517141 136 ntBASIC3.43□□□□□ -1.86
CHD1O14646 SUB1P3-201ENST00000564581 315 ntBASIC3.43□□□□□ -1.86
CHD1O14646 AC012119.1-201ENST00000603184 222 ntBASIC3.43□□□□□ -1.86
CHD1O14646 RPP40P2-201ENST00000603596 712 ntBASIC3.43□□□□□ -1.86
CHD1O14646 AL450489.1-201ENST00000612071 468 ntBASIC3.43□□□□□ -1.86
CHD1O14646 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHD1O14646 AC027514.1-201ENST00000588561 1603 ntBASIC3.43□□□□□ -1.86
CHD1O14646 AC009501.3-201ENST00000605001 1352 ntBASIC3.43□□□□□ -1.86
CHD1O14646 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.42□□□□□ -1.86
CHD1O14646 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD1O14646 RPL36AP33-201ENST00000450395 310 ntBASIC3.42□□□□□ -1.86
CHD1O14646 AL163540.1-201ENST00000485382 386 ntBASIC3.42□□□□□ -1.86
CHD1O14646 AC068446.3-201ENST00000555285 382 ntBASIC3.42□□□□□ -1.86
CHD1O14646 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD1O14646 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD1O14646 BX664608.1-201ENST00000610519 487 ntBASIC3.42□□□□□ -1.86
CHD1O14646 AC107871.2-201ENST00000612894 502 ntBASIC3.42□□□□□ -1.86
CHD1O14646 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD1O14646 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHD1O14646 RNA5SP190-201ENST00000365222 118 ntBASIC3.41□□□□□ -1.86
CHD1O14646 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD1O14646 SEC63P1-201ENST00000425785 1258 ntBASIC3.41□□□□□ -1.86
CHD1O14646 ARF4P2-201ENST00000430209 526 ntBASIC3.41□□□□□ -1.86
CHD1O14646 RPL23AP76-201ENST00000441860 458 ntBASIC3.41□□□□□ -1.86
CHD1O14646 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.41□□□□□ -1.86
CHD1O14646 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.41□□□□□ -1.86
CHD1O14646 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
CHD1O14646 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.41□□□□□ -1.86
CHD1O14646 MIR4303-201ENST00000581299 66 ntBASIC3.41□□□□□ -1.86
CHD1O14646 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.41□□□□□ -1.86
CHD1O14646 MIR6132-201ENST00000622083 109 ntBASIC3.41□□□□□ -1.86
CHD1O14646 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD1O14646 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD1O14646 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CHD1O14646 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD1O14646 AP006248.2-201ENST00000623309 592 ntBASIC3.41□□□□□ -1.86
CHD1O14646 AC093591.3-201ENST00000634516 308 ntBASIC3.41□□□□□ -1.86
CHD1O14646 AC092326.2-201ENST00000624772 1561 ntBASIC3.4□□□□□ -1.86
CHD1O14646 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CHD1O14646 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CHD1O14646 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD1O14646 IFNWP4-201ENST00000453148 294 ntBASIC3.4□□□□□ -1.87
CHD1O14646 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD1O14646 OR52A4P-203ENST00000498233 1014 ntBASIC3.4□□□□□ -1.87
CHD1O14646 TRMT112P2-201ENST00000512910 132 ntBASIC3.4□□□□□ -1.87
CHD1O14646 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD1O14646 AC020895.1-201ENST00000595362 272 ntBASIC3.4□□□□□ -1.87
CHD1O14646 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD1O14646 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD1O14646 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD1O14646 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD1O14646 MIR21-201ENST00000362134 72 ntBASIC3.39□□□□□ -1.87
CHD1O14646 SNORA51.11-201ENST00000384442 131 ntBASIC3.39□□□□□ -1.87
CHD1O14646 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD1O14646 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.39□□□□□ -1.87
CHD1O14646 AC017007.3-201ENST00000479865 435 ntBASIC3.39□□□□□ -1.87
CHD1O14646 AP003467.2-201ENST00000520175 319 ntBASIC3.39□□□□□ -1.87
CHD1O14646 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms