Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR4697-201ENST00000582977 78 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 CCDC58P3-201ENST00000590792 430 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC009220.3-201ENST00000604318 586 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AL031176.1-201ENST00000604554 466 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 AC131235.4-201ENST00000609288 620 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 VIS1.1-201ENST00000610517 203 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC28A1O00337 CRYM-AS1-204ENST00000637983 556 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SLC28A1O00337 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC28A1O00337 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC28A1O00337 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC28A1O00337 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SLC28A1O00337 SGO1P2-201ENST00000429458 1589 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC28A1O00337 OR5BR1P-201ENST00000524992 1330 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 OR5H2-201ENST00000355273 945 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC28A1O00337 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC28A1O00337 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC28A1O00337 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AL031679.1-201ENST00000400616 525 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 RNU2-47P-201ENST00000410649 186 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AL356968.1-201ENST00000416622 474 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.31□□□□□ -1.88
SLC28A1O00337 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AC105914.1-201ENST00000511798 226 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC006499.2-201ENST00000513470 337 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 SNORA31.8-201ENST00000516327 108 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.31□□□□□ -1.88
SLC28A1O00337 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC28A1O00337 CR383656.7-201ENST00000548164 174 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC004024.1-201ENST00000549244 247 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AL049838.1-201ENST00000563647 981 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC28A1O00337 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC28A1O00337 AC245884.10-201ENST00000597355 337 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC28A1O00337 AC231657.1-201ENST00000624313 397 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC116618.1-201ENST00000634617 774 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 AC090897.3-201ENST00000636973 1157 ntBASIC3.31□□□□□ -1.88
SLC28A1O00337 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.31□□□□□ -1.88
SLC28A1O00337 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SLC28A1O00337 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SLC28A1O00337 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SLC28A1O00337 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SLC28A1O00337 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC28A1O00337 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC28A1O00337 RPL23AP57-201ENST00000332361 466 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RNU6-173P-201ENST00000364215 104 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AL356131.1-201ENST00000405826 414 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RNU6-584P-201ENST00000410350 95 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC28A1O00337 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC28A1O00337 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 MTCO2P5-201ENST00000422621 426 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 SDCBPP1-201ENST00000440192 890 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RABEPKP1-201ENST00000440529 1026 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC28A1O00337 PTENP1-201ENST00000447117 1215 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AL359073.1-201ENST00000448036 403 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 ARPC3P5-201ENST00000448802 534 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 U3.44-201ENST00000458938 192 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AC097493.1-201ENST00000463958 372 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC28A1O00337 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SLC28A1O00337 AC068587.1-201ENST00000483613 781 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AC116353.3-201ENST00000511215 249 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.3□□□□□ -1.88
SLC28A1O00337 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC28A1O00337 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.3□□□□□ -1.88
SLC28A1O00337 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC28A1O00337 AC090695.1-201ENST00000561269 1222 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC28A1O00337 MIR5186-201ENST00000577504 120 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
SLC28A1O00337 AP001029.3-201ENST00000588063 596 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 BNIP3P40-201ENST00000596017 556 ntBASIC3.3□□□□□ -1.88
SLC28A1O00337 VN1R78P-201ENST00000597393 564 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms