Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.64□□□□□ -1.99
UPK1AO00322 HPRT1P3-201ENST00000539521 576 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.64□□□□□ -1.99
UPK1AO00322 AC022080.3-201ENST00000544433 482 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AL731537.2-201ENST00000561565 951 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC023824.3-201ENST00000569003 562 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC074051.3-201ENST00000570238 358 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 MIR3605-201ENST00000583214 100 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AL355812.1-201ENST00000603215 216 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC103881.1-201ENST00000603476 538 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPK1AO00322 AC003001.2-201ENST00000616294 831 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AC006213.5-201ENST00000619673 288 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.64□□□□□ -1.99
UPK1AO00322 AC020923.1-201ENST00000624021 917 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.64□□□□□ -1.99
UPK1AO00322 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UPK1AO00322 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UPK1AO00322 AC004925.1-201ENST00000624256 2706 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.64□□□□□ -1.99
UPK1AO00322 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.64□□□□□ -1.99
UPK1AO00322 AC008432.1-201ENST00000615912 1320 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 MFSD8-213ENST00000641134 1327 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
UPK1AO00322 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.64□□□□□ -1.99
UPK1AO00322 AC073055.1-201ENST00000456901 1621 ntBASIC2.64□□□□□ -1.99
UPK1AO00322 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
UPK1AO00322 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
UPK1AO00322 RNA5SP387-201ENST00000364226 106 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 RNU6-339P-201ENST00000384310 107 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 SNORA44-201ENST00000384584 132 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 UBA52P6-201ENST00000399822 382 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 RNA5SP56-201ENST00000410277 118 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 MTCO3P12-201ENST00000416718 547 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.63□□□□□ -1.99
UPK1AO00322 RPP40P1-201ENST00000426762 456 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AC073508.1-201ENST00000428866 656 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AC006946.1-201ENST00000429106 328 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.63□□□□□ -1.99
UPK1AO00322 ST13P20-201ENST00000447996 1065 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.63□□□□□ -1.99
UPK1AO00322 MTND2P30-201ENST00000456663 382 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 snoU13.22-201ENST00000459428 104 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 RPS27AP9-201ENST00000477681 438 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 HMGB1P22-201ENST00000505315 124 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 MTCO3P44-201ENST00000510977 541 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.63□□□□□ -1.99
UPK1AO00322 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.63□□□□□ -1.99
UPK1AO00322 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.63□□□□□ -1.99
UPK1AO00322 AC124293.1-201ENST00000530034 493 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.63□□□□□ -1.99
UPK1AO00322 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 ZNF92P2-201ENST00000600543 1059 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.63□□□□□ -1.99
UPK1AO00322 AC024153.1-201ENST00000603103 365 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AC068722.2-201ENST00000618734 544 ntBASIC2.63□□□□□ -1.99
UPK1AO00322 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
UPK1AO00322 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
UPK1AO00322 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
UPK1AO00322 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UPK1AO00322 AC006378.2-201ENST00000623178 2476 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPK1AO00322 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UPK1AO00322 Y_RNA.333-201ENST00000365274 102 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UPK1AO00322 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.62□□□□□ -1.99
UPK1AO00322 RAD23BP2-201ENST00000416003 1207 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AL121882.1-201ENST00000422893 417 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AC233981.1-201ENST00000423224 461 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AL513043.1-201ENST00000439124 535 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 RPS3AP12-201ENST00000443616 753 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.62□□□□□ -1.99
UPK1AO00322 RPL7P55-201ENST00000450522 746 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 SSXP4-201ENST00000451349 245 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UPK1AO00322 AP001025.2-201ENST00000490908 477 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AC026427.2-201ENST00000506228 536 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 RNA5SP468-201ENST00000516782 93 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 HMGB1P41-201ENST00000520234 440 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AC113192.3-201ENST00000529152 742 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.62□□□□□ -1.99
UPK1AO00322 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.62□□□□□ -1.99
UPK1AO00322 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.62□□□□□ -1.99
UPK1AO00322 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AC093732.2-201ENST00000607950 274 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.62□□□□□ -1.99
UPK1AO00322 AC090116.1-201ENST00000615679 446 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.62□□□□□ -1.99
UPK1AO00322 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.62□□□□□ -1.99
UPK1AO00322 AC090617.7-201ENST00000623952 126 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AC106730.3-201ENST00000624568 641 ntBASIC2.62□□□□□ -1.99
UPK1AO00322 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.62□□□□□ -1.99
UPK1AO00322 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 1412.5 ms