Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 RPL21P89-201ENST00000444021 467 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 RNU7-136P-201ENST00000458819 69 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 snoU13.8-201ENST00000458890 104 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 MEMO1P3-201ENST00000459811 302 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC093278.1-201ENST00000494700 600 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 SNORA64.4-201ENST00000516632 81 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AC104027.1-201ENST00000521887 300 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 CR383656.7-201ENST00000548164 174 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC090615.1-201ENST00000577519 154 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC093227.2-201ENST00000589357 285 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC188H7C350 VN1R78P-201ENST00000597393 564 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 BNIP3P33-201ENST00000598912 569 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 VN1R82P-201ENST00000601481 356 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 DUXAP11-201ENST00000603858 526 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC012531.5-201ENST00000611375 151 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC188H7C350 AL354798.1-201ENST00000622505 329 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AC095031.1-201ENST00000623685 672 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC006927.4-201ENST00000639187 543 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AL022578.1-201ENST00000439330 1433 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC188H7C350 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC188H7C350 AC007256.1-201ENST00000392253 2765 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AC032011.1-201ENST00000611703 1549 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC188H7C350 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC188H7C350 DEFB109C-201ENST00000382575 264 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 DEFB109B-201ENST00000382656 264 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 HMGB1P17-201ENST00000403495 628 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AL117339.2-201ENST00000430475 180 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 SNRPEP7-201ENST00000438350 220 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AC008264.1-201ENST00000447612 367 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AC114755.5-201ENST00000447760 831 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 RPL23AP31-201ENST00000456160 467 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 SNORD11.1-201ENST00000459482 85 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AP001992.1-205ENST00000462248 379 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 RPS27P29-201ENST00000463110 252 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC188H7C350 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AC010460.1-201ENST00000507087 466 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AC110760.3-202ENST00000515177 371 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 MIR2116-201ENST00000517221 80 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC188H7C350 DEFB131D-201ENST00000526803 184 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 SNRPGP16-201ENST00000533275 226 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC188H7C350 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC188H7C350 CYCSP2-201ENST00000558168 301 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AC007224.1-201ENST00000564410 144 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC188H7C350 FAM60BP-201ENST00000578364 658 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC188H7C350 AL360181.4-201ENST00000621752 134 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 AL356585.4-201ENST00000623078 1229 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC188H7C350 AC073476.4-201ENST00000628409 72 ntBASIC3.62□□□□□ -1.83
CCDC188H7C350 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC188H7C350 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCDC188H7C350 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC188H7C350 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC188H7C350 RNU1-13P-201ENST00000384499 162 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 CYCSP45-201ENST00000402289 315 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC188H7C350 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC188H7C350 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC188H7C350 AC097262.1-201ENST00000452559 548 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AC234775.1-201ENST00000454247 670 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 BX322784.1-201ENST00000455793 1077 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 AL136097.1-201ENST00000456945 913 ntBASIC3.61□□□□□ -1.83
CCDC188H7C350 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms