Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL353678.1-201ENST00000422735 741 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL590399.6-201ENST00000446396 307 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 PTENP1-201ENST00000447117 1215 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 TRBV26-201ENST00000456572 344 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 RPS29P2-201ENST00000479278 136 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 ACTG1P13-201ENST00000486987 1043 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 RN7SKP265-201ENST00000516448 223 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 HIGD1AP1-201ENST00000550979 275 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 MTND4P33-201ENST00000556706 766 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC022662.1-201ENST00000580252 331 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC022146.1-201ENST00000595307 847 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC073657.2-201ENST00000605661 303 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 RMST_8.1-201ENST00000610287 165 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC008083.4-201ENST00000615076 444 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC009464.1-201ENST00000615731 469 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AL356321.1-201ENST00000621360 228 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC120349.2-201ENST00000625002 298 ntBASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEDD8-MDP1E9PL57 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-730P-201ENST00000383954 104 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 MIR124-3-201ENST00000384866 87 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 ARF4P3-201ENST00000397387 509 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 USP9YP11-201ENST00000427537 717 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 COX7BP2-201ENST00000437976 242 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 PABPC1P3-201ENST00000469174 459 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 FCF1P3-201ENST00000496394 590 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 MTCO3P44-201ENST00000510977 541 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 PTGES3P3-201ENST00000511479 482 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 HIGD1AP10-201ENST00000527837 282 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC125611.1-201ENST00000549563 229 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 DUXAP3-201ENST00000603616 594 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC069304.2-201ENST00000605154 435 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC107952.2-201ENST00000606048 486 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AL355816.2-201ENST00000610049 647 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC092106.3-201ENST00000611308 722 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 AC013470.4-201ENST00000619978 986 ntBASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD8-MDP1E9PL57 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 GNG5P1-201ENST00000255500 204 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 Y_RNA.25-201ENST00000362528 102 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 RNA5SP167-201ENST00000365461 116 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU6-356P-201ENST00000384140 107 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 RN7SKP285-201ENST00000410137 318 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 RNU2-28P-201ENST00000410457 189 ntBASIC3.38□□□□□ -1.87
NEDD8-MDP1E9PL57 AC007390.1-201ENST00000415722 356 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms