Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC091516.1-201ENST00000549191 703 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 MTND1P15-201ENST00000579262 949 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC020914.4-201ENST00000597690 277 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 BNIP3P8-201ENST00000597863 560 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC091805.2-201ENST00000603848 235 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AL021997.1-201ENST00000605757 193 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC131902.3-201ENST00000611767 581 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC009704.2-201ENST00000618739 483 ntBASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
TCRBV7S3A2A0A539 AC009951.1-201ENST00000623674 2614 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 RNA5SP258-201ENST00000362750 119 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 Y_RNA.234-201ENST00000364409 97 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-359P-201ENST00000365466 108 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC019155.1-201ENST00000382242 574 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-648P-201ENST00000410190 107 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 RNU4-6P-201ENST00000410804 122 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 RPL37P18-201ENST00000411602 243 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 MTCO1P21-201ENST00000416634 589 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 USP9YP13-201ENST00000417797 480 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 MTCO3P30-201ENST00000426425 670 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 snoU109.1-201ENST00000459339 135 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 DUXAP2-201ENST00000519198 589 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC024224.1-201ENST00000538284 609 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC023575.1-201ENST00000580510 358 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 DEFB131E-202ENST00000602581 683 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC073648.5-201ENST00000603502 305 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 BRDTP1-201ENST00000605735 677 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC131238.1-201ENST00000617135 328 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC018755.4-201ENST00000619715 454 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 AC099842.1-201ENST00000619919 596 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 OR52H1-202ENST00000641796 1061 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 NCAPGP1-201ENST00000505112 1814 ntBASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
TCRBV7S3A2A0A539 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
TCRBV7S3A2A0A539 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC092447.7-201ENST00000422212 1621 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC090229.1-201ENST00000590983 1609 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RNU1-18P-201ENST00000363062 164 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-761P-201ENST00000384148 107 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-1042P-201ENST00000384204 107 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 MIR153-1-201ENST00000384914 90 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 MT-TC-201ENST00000387405 66 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL356421.1-201ENST00000403255 413 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RNA5SP56-201ENST00000410277 118 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 Y_RNA.619-201ENST00000410951 90 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AF274854.1-201ENST00000413236 615 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC108032.1-201ENST00000416706 207 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC127526.1-201ENST00000417526 366 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AIMP1P1-201ENST00000418670 937 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 MTCYBP24-201ENST00000420387 1106 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AC006548.1-201ENST00000427470 102 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RPS27AP12-201ENST00000429552 465 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 AL450263.2-201ENST00000439400 589 ntBASIC3.96□□□□□ -1.78
TCRBV7S3A2A0A539 RPL23AP33-201ENST00000442301 452 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms