Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 RNU6-335P-201ENST00000364563 113 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 RNU2-52P-201ENST00000410680 190 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 MTND4P11-201ENST00000417020 1058 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 YME1L1P1-201ENST00000429435 297 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 S100A11P2-201ENST00000467589 312 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC108734.3-201ENST00000481241 1165 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 MTCO3P35-201ENST00000485582 781 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 ACTR6P1-201ENST00000514311 1104 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 COX6CP8-201ENST00000522620 226 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC087373.1-201ENST00000524920 491 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 AP003122.6-201ENST00000623831 495 ntBASIC2.08□□□□□ -2.08
AP4S1Q9Y587 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
AP4S1Q9Y587 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AL365361.1-201ENST00000566942 3481 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AL359693.1-201ENST00000614959 2407 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 Y_RNA.126-201ENST00000363382 111 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 RNU6-1027P-201ENST00000383998 107 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 MIR34A-201ENST00000385130 110 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC007064.1-201ENST00000412238 351 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 TRGV7-201ENST00000427089 353 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 FAM133DP-201ENST00000464802 691 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 RN7SKP132-201ENST00000516001 208 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 HMGB1P23-201ENST00000518743 568 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 CIR1P1-201ENST00000524055 1133 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC113192.3-201ENST00000529152 742 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 OSBPL9P3-201ENST00000534523 595 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 ANP32BP3-201ENST00000559213 706 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 ELOCP29-201ENST00000588193 334 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC020895.1-201ENST00000595362 272 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 ATP1B3P1-201ENST00000605365 821 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC092954.1-201ENST00000609121 445 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC046143.2-201ENST00000609789 160 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC079597.1-201ENST00000624306 508 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
AP4S1Q9Y587 AC096656.1-201ENST00000623826 1364 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 ZNF833P-201ENST00000424938 1494 ntBASIC2.07□□□□□ -2.08
AP4S1Q9Y587 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 SNORA67.4-201ENST00000384688 142 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC005005.2-201ENST00000420779 380 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AL591719.1-201ENST00000444669 744 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC087879.1-201ENST00000474343 374 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 HIGD1AP18-201ENST00000520730 278 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 OR11H5P-201ENST00000554039 926 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 SERPINE4P-201ENST00000554978 281 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 LRRC37A5P-203ENST00000580181 585 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC006023.1-201ENST00000603944 259 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC008962.1-201ENST00000605729 304 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC007342.8-201ENST00000623278 678 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC093591.3-201ENST00000634516 308 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AC010680.1-201ENST00000590024 3590 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
AP4S1Q9Y587 Z99496.1-201ENST00000469424 1477 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 AP001350.1-201ENST00000601906 1524 ntBASIC2.06□□□□□ -2.08
AP4S1Q9Y587 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 SNORA71.3-201ENST00000362582 128 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 RNU6-799P-201ENST00000363567 107 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 RNA5SP160-201ENST00000364866 120 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms