Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SNORD109B-201ENST00000458961 67 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SNORD109A-201ENST00000459128 67 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 XKRY-201ENST00000510392 1100 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 TTC39CP1-201ENST00000512513 755 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SNORA31.1-201ENST00000515993 133 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SNORA31.5-201ENST00000516190 133 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 COX6CP8-201ENST00000522620 226 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AP003385.6-201ENST00000531603 374 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 OSBPL9P3-201ENST00000534523 595 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 HMGN2P28-201ENST00000606102 262 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SCARNA15.3-201ENST00000626315 122 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 MIR1291-201ENST00000627649 87 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SCARNA4.1-201ENST00000628597 123 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 AC016717.2-201ENST00000609089 5141 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 ZNF720P1-201ENST00000562403 1939 ntBASIC1.64□□□□□ -2.15
UBE2D4Q9Y2X8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 DEFB109C-201ENST00000382575 264 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 DEFB109B-201ENST00000382656 264 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 MIR634-201ENST00000385208 97 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AL138880.1-201ENST00000405824 642 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 RNF19BPX-201ENST00000426224 625 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 MTATP6P4-201ENST00000427725 675 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 ARL5AP4-201ENST00000430731 512 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC025750.2-201ENST00000442609 450 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 RBM43P1-201ENST00000476891 1081 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC011825.1-201ENST00000484967 388 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC079804.2-201ENST00000490376 200 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC080014.1-201ENST00000496877 1201 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 SETP12-201ENST00000514068 805 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 MTCYBP41-201ENST00000528913 1123 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AP000889.2-201ENST00000532684 490 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC105137.2-201ENST00000569073 466 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC090616.5-202ENST00000582111 297 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 ELOCP29-201ENST00000588193 334 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 VN1R78P-201ENST00000597393 564 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 AC010620.2-201ENST00000600135 313 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 ATP1B3P1-201ENST00000605365 821 ntBASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
UBE2D4Q9Y2X8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC244517.1-201ENST00000606030 2086 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 RNU6-301P-201ENST00000384277 107 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 SNORA51.11-201ENST00000384442 131 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 MIR518C-201ENST00000384822 101 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 MIR34A-201ENST00000385130 110 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC091390.3-201ENST00000426478 338 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 MRPL42P6-201ENST00000486397 371 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 MTND3P24-201ENST00000506306 329 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC026436.1-201ENST00000510537 270 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC016550.3-201ENST00000515706 767 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 RNU6-1073P-201ENST00000517182 106 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 CR383656.14-201ENST00000551951 406 ntBASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.62□□□□□ -2.15
UBE2D4Q9Y2X8 MIR6840-201ENST00000611937 71 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms