Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 AL645939.1-201ENST00000453429 797 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 OR5D17P-201ENST00000531492 978 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 AC010198.2-201ENST00000550612 259 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 AL022099.1-201ENST00000604551 712 ntBASIC3.34□□□□□ -1.88
SHANK2Q9UPX8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 AC097714.1-201ENST00000511272 1647 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 U8.8-201ENST00000365399 135 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 DEFA7P-201ENST00000382676 285 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 MIR499A-201ENST00000384903 122 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 MIR518E-201ENST00000385252 88 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 SNORA17.3-201ENST00000391159 129 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 CYCSP49-201ENST00000420810 319 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 AC007536.1-201ENST00000533382 349 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 AC093673.2-201ENST00000609674 331 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 AL110115.1-201ENST00000614396 364 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 U6.98-201ENST00000637157 84 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 GABPAP-201ENST00000419271 1356 ntBASIC3.33□□□□□ -1.88
SHANK2Q9UPX8 MTND5P29-201ENST00000458676 1807 ntBASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 SNORA25.6-201ENST00000364121 118 ntBASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 MTND5P21-201ENST00000531961 522 ntBASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 AC135628.1-201ENST00000568867 534 ntBASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 AC011494.1-201ENST00000596454 237 ntBASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHANK2Q9UPX8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 RPS26P30-201ENST00000443431 335 ntBASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.31□□□□□ -1.88
SHANK2Q9UPX8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 RPL7P54-201ENST00000438336 674 ntBASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 TRAV31-201ENST00000502780 342 ntBASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 AC021733.2-201ENST00000518830 497 ntBASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 AC103710.1-201ENST00000610003 901 ntBASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHANK2Q9UPX8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 NPM1P10-201ENST00000398310 865 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 AL023284.1-201ENST00000403956 276 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 RNU2-2P-201ENST00000410396 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 ELOCP13-201ENST00000443934 329 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 snoU13.18-201ENST00000459483 104 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 AC068339.2-201ENST00000534395 618 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.15-201ENST00000611544 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.16-201ENST00000613119 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.12-201ENST00000613778 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.20-201ENST00000613956 192 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.9-201ENST00000615427 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.11-201ENST00000616345 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.2-201ENST00000616535 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.3-201ENST00000617785 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.19-201ENST00000618602 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 RNU2-1-201ENST00000618664 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.6-201ENST00000619225 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.5-201ENST00000619465 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 U2.10-201ENST00000620268 191 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 CYP3A51P-201ENST00000633513 256 ntBASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.29□□□□□ -1.88
SHANK2Q9UPX8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms