Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 RNU1-43P-201ENST00000365052 165 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 RNU6-1226P-201ENST00000384317 107 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 MRPL42P3-201ENST00000401492 326 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 RPL21P67-201ENST00000402896 478 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 MIR1286-201ENST00000408112 78 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 GNG5P5-201ENST00000420444 220 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AL139396.1-201ENST00000421137 167 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AL160004.2-201ENST00000432935 350 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC005019.1-201ENST00000436455 431 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 UBE2V1P13-201ENST00000436983 439 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 MTND1P17-201ENST00000448961 204 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 RNU6-764P-201ENST00000516396 105 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 RNU7-51P-201ENST00000516560 62 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC090136.1-201ENST00000520009 240 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 HMGB1P41-201ENST00000520234 440 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 MTND4P7-201ENST00000523876 130 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 MIR3176-201ENST00000582210 90 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC133644.2-201ENST00000608142 540 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 Z82243.1-201ENST00000609432 473 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AL157817.1-201ENST00000614264 790 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 Z69720.2-201ENST00000624755 279 ntBASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.37□□□□□ -1.55
AP4E1Q9UPM8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 THAP12P4-201ENST00000528321 2266 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.47-201ENST00000362697 108 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.135-201ENST00000363439 95 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 RNU6-1040P-201ENST00000383974 107 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.482-201ENST00000384377 111 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.557-201ENST00000384680 107 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MIR600-201ENST00000385007 98 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 DUTP5-201ENST00000406790 469 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MIR1182-201ENST00000408363 97 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 HMGB3P2-201ENST00000411913 584 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AL591848.1-201ENST00000413092 322 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 FABP7P2-201ENST00000429946 379 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC009238.2-201ENST00000431026 355 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 RAC1P7-201ENST00000445367 377 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AL031584.1-201ENST00000447169 754 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 CECR9-201ENST00000453421 199 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC009127.1-201ENST00000467090 155 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 RNU6-256P-201ENST00000516747 97 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AP000763.2-201ENST00000540641 163 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MIR4489-201ENST00000578869 62 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 COX6CP3-201ENST00000580869 223 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MIR3672-201ENST00000584290 82 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC023043.2-201ENST00000589678 1026 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC073539.2-201ENST00000597113 165 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC104662.1-201ENST00000604448 511 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC126915.2-201ENST00000610957 190 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MIR6862-1-201ENST00000613016 70 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MIR6862-2-201ENST00000614755 70 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms