Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL049829.1-201ENST00000465411 156 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 HMGB1P25-201ENST00000468402 607 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 RPS29P2-201ENST00000479278 136 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 FCF1P8-201ENST00000510322 597 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC026412.2-201ENST00000512270 1075 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC027309.2-201ENST00000520566 192 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 RPL21P12-201ENST00000559810 515 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 MIR4425-201ENST00000580572 84 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC006557.5-201ENST00000603126 811 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AL365400.2-201ENST00000605604 902 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AL450489.1-201ENST00000612071 468 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC106858.1-201ENST00000637497 429 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 AC005183.1-201ENST00000603687 1979 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
NPIPA1Q9UND3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 MAPK10-266ENST00000641066 6555 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RNA5SP295-201ENST00000362655 121 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 MIR128-1-201ENST00000384921 82 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RNU6-1000P-201ENST00000391066 106 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 SNRPEP2-201ENST00000397592 279 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RNU2-15P-201ENST00000410692 191 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC112492.1-201ENST00000449607 712 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC115115.1-201ENST00000449927 248 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RPL6P9-201ENST00000466502 859 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RPL23AP44-201ENST00000482216 473 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC010460.2-201ENST00000509054 677 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC093752.1-206ENST00000511823 336 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 SNORA19.3-201ENST00000516165 130 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 SCARNA13-201ENST00000516672 275 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 RN7SKP60-201ENST00000516985 239 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 LRRC6P1-201ENST00000532188 885 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC011471.1-201ENST00000585766 187 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 DNAJC19P3-201ENST00000594491 331 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 VN1R92P-201ENST00000598511 928 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AL606834.2-201ENST00000602954 668 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AP001330.4-201ENST00000604350 154 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AL162713.1-201ENST00000604480 262 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC055876.5-201ENST00000605667 259 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 MIR7112-201ENST00000616126 65 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AL138960.2-201ENST00000625145 535 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AL513302.2-201ENST00000562313 1842 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA1Q9UND3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL049780.3-201ENST00000624612 1583 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 GNG5P1-201ENST00000255500 204 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 MTCO1P56-201ENST00000401674 224 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 RNU2-42P-201ENST00000410697 113 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 OR4K6P-201ENST00000416478 897 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 MTND4LP10-201ENST00000435146 291 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC006028.1-201ENST00000438379 402 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC020893.1-201ENST00000502452 580 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 MLLT10P2-201ENST00000506434 249 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 PCBP2P3-201ENST00000509726 843 ntBASIC3.1□□□□□ -1.91
NPIPA1Q9UND3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms