Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ST13P20-201ENST00000447996 1065 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 AC233982.1-201ENST00000451247 436 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 MRPL35P4-201ENST00000453682 566 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 SNORA31.13-201ENST00000516624 135 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 SNORA31.21-201ENST00000517180 77 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS29Q9UBQ0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS29Q9UBQ0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 AC125611.2-201ENST00000551907 647 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 GTF2IP8-201ENST00000560687 584 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 AC009268.1-201ENST00000561352 1203 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 EIF5A2P1-201ENST00000564027 460 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 AC090312.2-201ENST00000582687 378 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 BX664608.1-201ENST00000610519 487 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS29Q9UBQ0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
VPS29Q9UBQ0 MIR7-1-201ENST00000384871 110 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 VTA1P1-201ENST00000414044 866 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 RPL36AP6-201ENST00000435770 321 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 RPL23AP20-201ENST00000447965 421 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AL034418.1-201ENST00000448675 860 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC080014.1-201ENST00000496877 1201 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC008565.1-201ENST00000509046 885 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 C1DP5-201ENST00000525775 383 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC087481.2-201ENST00000565492 330 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AL451007.1-201ENST00000595491 289 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC008687.2-201ENST00000597865 520 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 XIAPP1-201ENST00000603162 600 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC106791.2-201ENST00000604680 391 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 AL359198.2-201ENST00000611836 194 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC097372.4-201ENST00000625025 466 ntBASIC2.53□□□□□ -2
VPS29Q9UBQ0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.53□□□□□ -2
VPS29Q9UBQ0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
VPS29Q9UBQ0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2.01
VPS29Q9UBQ0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 RNA5SP258-201ENST00000362750 119 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 RNU4-23P-201ENST00000362839 140 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 RNU6-799P-201ENST00000363567 107 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 RAP1BP1-201ENST00000412709 553 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC073508.1-201ENST00000428866 656 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC011816.1-201ENST00000441346 546 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 UBBP3-201ENST00000445497 241 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC015908.1-201ENST00000478739 476 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC008885.2-201ENST00000509506 930 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC026412.2-201ENST00000512270 1075 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC100870.1-201ENST00000522035 505 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 HSPE1P20-201ENST00000538133 289 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC138761.3-201ENST00000579993 334 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AL137790.1-201ENST00000634283 177 ntBASIC2.52□□□□□ -2.01
VPS29Q9UBQ0 AC091564.4-201ENST00000533934 2194 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 SSXP10-201ENST00000402595 565 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 RNA5SP492-201ENST00000411330 114 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 RPL21P32-201ENST00000419877 477 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AL606495.1-201ENST00000422100 813 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AL513321.1-201ENST00000441175 761 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 Z96811.1-201ENST00000445880 108 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 RNA5SP310-201ENST00000459084 116 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC126182.1-201ENST00000478134 357 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 SRIP1-201ENST00000489235 288 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 OR7K1P-201ENST00000546439 926 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AL391156.1-201ENST00000554965 554 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AADACP1-206ENST00000561502 1193 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms