Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC092324.1-201ENST00000468671 324 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC111000.3-201ENST00000508057 576 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AP003497.1-201ENST00000528472 562 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 OR4R1P-201ENST00000529879 463 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC105224.1-201ENST00000587055 421 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC022726.1-201ENST00000587475 207 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC044792.1-201ENST00000593294 196 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC013553.2-201ENST00000604244 589 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AL391358.1-201ENST00000605342 190 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 ZNF680P1-201ENST00000436625 1469 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC091046.3-201ENST00000631455 1574 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 AC022893.2-201ENST00000564832 3296 ntBASIC4.98□□□□□ -1.61
PPARGC1AQ9UBK2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC000123.3-201ENST00000624029 4975 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 MAPK10-320ENST00000641462 6696 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RNU6-845P-201ENST00000362578 103 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 Y_RNA.142-201ENST00000363491 102 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RNU6-606P-201ENST00000384721 111 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AL049697.2-201ENST00000403708 294 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RPS15AP12-201ENST00000419498 388 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 SDCBPP3-201ENST00000419629 891 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RPS17P8-201ENST00000434525 335 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC140076.1-201ENST00000449897 361 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RPS27AP17-201ENST00000463344 455 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 PCBP2P3-201ENST00000509726 843 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC016065.2-201ENST00000514530 444 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 RNA5SP464-201ENST00000516251 108 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 OR5BN1P-201ENST00000532955 829 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 MIR5699-201ENST00000578903 90 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 MIR3667-201ENST00000581025 74 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC007566.2-201ENST00000603642 413 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AL031320.1-201ENST00000604177 357 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 MIR6730-201ENST00000622213 67 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AP000843.1-201ENST00000624880 701 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 TLK1P1-201ENST00000456760 2440 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 ZFRP1-201ENST00000457579 2970 ntBASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PPARGC1AQ9UBK2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
PPARGC1AQ9UBK2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.96□□□□□ -1.61
PPARGC1AQ9UBK2 DHX9P1-201ENST00000436565 3076 ntBASIC4.96□□□□□ -1.61
PPARGC1AQ9UBK2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PPARGC1AQ9UBK2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
PPARGC1AQ9UBK2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PPARGC1AQ9UBK2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 snosnR66.1-201ENST00000391095 99 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AL354719.1-201ENST00000406535 843 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 RNU2-62P-201ENST00000410868 191 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 RN7SKP100-201ENST00000411258 284 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AC092832.1-201ENST00000422934 400 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 NRBF2P3-201ENST00000432731 865 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AL162388.1-201ENST00000450912 352 ntBASIC4.96□□□□□ -1.62
PPARGC1AQ9UBK2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms