Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC040174.2-201ENST00000602701 465 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC132825.7-201ENST00000638744 335 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 OR5BR1P-201ENST00000524992 1330 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 MFSD8-213ENST00000641134 1327 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 SNORA14A-201ENST00000364773 135 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 CD24P4-201ENST00000382840 243 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 RNA5SP38-201ENST00000410750 119 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 RNA5SP492-201ENST00000411330 114 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 USP9YP36-201ENST00000424581 829 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 RPS6P14-201ENST00000425165 719 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 UBE2V1P6-201ENST00000430840 422 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC093156.1-201ENST00000440382 670 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AL645638.1-201ENST00000440519 361 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AL591503.2-201ENST00000442314 1005 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 PRDX3P3-201ENST00000447765 522 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC025181.1-201ENST00000477507 416 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 RPL9P33-201ENST00000484311 566 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC011352.3-201ENST00000505162 593 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 HSPD1P15-201ENST00000505573 1122 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC106734.1-201ENST00000568646 663 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 SNORD39.3-201ENST00000584451 71 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC009220.3-201ENST00000604318 586 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC106900.2-201ENST00000604994 317 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC004696.1-201ENST00000614345 607 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC006213.5-201ENST00000619673 288 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 AC022509.4-201ENST00000621404 572 ntBASIC2.72□□□□□ -1.97
VAPAQ9P0L0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VAPAQ9P0L0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 SNORD56.4-201ENST00000363883 71 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 U3.19-201ENST00000390893 196 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 GSTA8P-201ENST00000404253 637 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 RNA5SP120-201ENST00000410900 112 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 ATG3P1-201ENST00000419507 911 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 RPL21P32-201ENST00000419877 477 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 MUPP-201ENST00000438111 566 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 MTCYBP34-201ENST00000439552 670 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 RPL23AP20-201ENST00000447965 421 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 RPS20P24-201ENST00000457473 361 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 FAM133DP-201ENST00000464802 691 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 RPL23AP11-201ENST00000475260 469 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 RN7SL504P-201ENST00000494496 287 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 OR2A20P-203ENST00000498397 1268 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC026412.2-201ENST00000512270 1075 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 OR4P1P-201ENST00000530808 1136 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC104229.1-201ENST00000561364 255 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 MIR5004-201ENST00000579078 107 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 BPTFP1-201ENST00000579209 492 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 MIR3158-1-201ENST00000583596 81 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC012669.1-201ENST00000603209 283 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 ELOCP35-201ENST00000604289 336 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC106791.2-201ENST00000604680 391 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AL109618.2-201ENST00000605527 211 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AL359198.2-201ENST00000611836 194 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC091046.2-201ENST00000620775 665 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AL161637.1-201ENST00000622380 412 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 AC106730.3-201ENST00000624568 641 ntBASIC2.71□□□□□ -1.98
VAPAQ9P0L0 BX649567.1-201ENST00000642071 1134 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms