Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC020593.1-201ENST00000507399 299 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 GMPSP1-201ENST00000514075 579 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC011979.2-201ENST00000527568 352 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 CCNG2P1-201ENST00000549521 1000 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 AL391156.1-201ENST00000554965 554 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC024941.1-201ENST00000612250 334 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC008121.2-201ENST00000614647 523 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 PISRT1-201ENST00000626175 531 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
DDX56Q9NY93 AC105074.1-201ENST00000623380 3095 ntBASIC4.7□□□□□ -1.66
DDX56Q9NY93 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DDX56Q9NY93 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DDX56Q9NY93 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 MFSD8-242ENST00000641690 4199 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 RNA5SP307-201ENST00000362863 116 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 DEFB109C-201ENST00000382575 264 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 DEFB109B-201ENST00000382656 264 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 SNORA75-201ENST00000384158 137 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 Y_RNA.559-201ENST00000384686 107 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 TXNP7-201ENST00000406296 293 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 RNA5SP146-201ENST00000410743 123 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 RN7SKP216-201ENST00000411050 312 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 RPS12P10-201ENST00000427031 377 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 RPL7L1P10-201ENST00000427790 463 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 RPL23AP93-201ENST00000440847 484 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 RPL26P6-201ENST00000440913 438 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 MTCO3P45-201ENST00000443036 613 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC244505.5-201ENST00000443639 207 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX56Q9NY93 MTCO2P29-201ENST00000465212 189 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AP001086.1-201ENST00000494882 321 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 RN7SKP298-201ENST00000515950 94 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 RN7SKP289-201ENST00000517244 295 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AP003122.4-201ENST00000530980 758 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 RPL23AP87-202ENST00000573039 466 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AF038458.1-201ENST00000588406 262 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC090578.1-201ENST00000604955 591 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AL139286.2-201ENST00000606838 396 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AL138721.1-201ENST00000616756 179 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC072046.2-201ENST00000618366 268 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC091953.2-201ENST00000623979 160 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC010928.1-201ENST00000592477 1447 ntBASIC4.69□□□□□ -1.66
DDX56Q9NY93 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
DDX56Q9NY93 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX56Q9NY93 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX56Q9NY93 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX56Q9NY93 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
DDX56Q9NY93 MTND4P26-201ENST00000415971 1359 ntBASIC4.68□□□□□ -1.66
DDX56Q9NY93 GABPAP-201ENST00000419271 1356 ntBASIC4.68□□□□□ -1.66
DDX56Q9NY93 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
DDX56Q9NY93 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
DDX56Q9NY93 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.68□□□□□ -1.66
DDX56Q9NY93 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
DDX56Q9NY93 RNY4P34-201ENST00000364779 95 ntBASIC4.68□□□□□ -1.66
DDX56Q9NY93 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
DDX56Q9NY93 SNORD116-4-201ENST00000384733 96 ntBASIC4.68□□□□□ -1.66
DDX56Q9NY93 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
DDX56Q9NY93 SNORA74C-2-201ENST00000411179 201 ntBASIC4.68□□□□□ -1.66
DDX56Q9NY93 RPL21P24-201ENST00000413752 448 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms