Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 PIGPP2-201ENST00000411569 458 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 OR8G2P-201ENST00000412796 908 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 HSFY4P-201ENST00000415994 1181 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 TIMM9P2-201ENST00000419324 266 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC090960.1-201ENST00000421072 306 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 OR4F13P-201ENST00000428478 931 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 SETP8-201ENST00000435341 628 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 MTCO1P48-201ENST00000448024 1096 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 RPL18AP17-201ENST00000455326 198 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC103987.1-201ENST00000473394 348 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 BZW1P2-201ENST00000473537 826 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 RPS4XP15-201ENST00000489210 795 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC078918.1-201ENST00000498515 228 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 RPF2P2-201ENST00000504693 896 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC016065.2-201ENST00000514530 444 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 RPL12P22-201ENST00000519073 490 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC245166.1-201ENST00000521012 253 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 IGHV3-76-201ENST00000522465 295 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 ARL2BPP5-201ENST00000523141 481 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC125611.1-201ENST00000549563 229 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 LARP7P2-201ENST00000575306 125 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 ISCA1P3-201ENST00000577104 373 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 MIR5096-201ENST00000583713 70 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC090616.2-202ENST00000584248 222 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC010620.1-201ENST00000601088 1102 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC112220.3-201ENST00000605502 502 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC105429.2-201ENST00000610567 517 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC005962.2-201ENST00000611427 652 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AL136981.2-201ENST00000617319 734 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 MIR6500-201ENST00000622700 86 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC079248.2-201ENST00000623779 326 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC026422.1-201ENST00000623961 452 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.39□□□□□ -1.87
NDE1Q9NXR1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 AC087359.1-201ENST00000508335 1740 ntBASIC3.39□□□□□ -1.87
NDE1Q9NXR1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC126755.2-208ENST00000327792 462 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC138969.1-213ENST00000331436 462 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 RNU6-1226P-201ENST00000384317 107 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC073264.1-201ENST00000411508 416 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 RPS15AP40-201ENST00000419621 391 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL365203.2-201ENST00000423444 196 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 UBE2V1P1-201ENST00000430836 445 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC092427.1-201ENST00000439177 601 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 UBE2D3P4-201ENST00000441973 436 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 VN1R10P-201ENST00000447106 875 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 RPL37P6-202ENST00000464216 403 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL136126.1-201ENST00000473603 402 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC010301.1-201ENST00000473936 355 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 MTND3P7-201ENST00000474435 343 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC104685.1-201ENST00000502445 371 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC108078.3-201ENST00000502633 489 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC111000.2-201ENST00000507775 550 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AL356057.1-201ENST00000533798 831 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
NDE1Q9NXR1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.38□□□□□ -1.87
NDE1Q9NXR1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms