Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CLN6Q9NWW5 AL512283.1-201ENST00000606756 1384 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 RNU6-575P-201ENST00000411326 105 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MTCO2P1-201ENST00000424648 477 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MTATP6P4-201ENST00000427725 675 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 UBE2V1P6-201ENST00000430840 422 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MTND4LP10-201ENST00000435146 291 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC005019.1-201ENST00000436455 431 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MTCO1P48-201ENST00000448024 1096 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC015908.1-201ENST00000478739 476 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC110794.1-201ENST00000505816 425 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC006390.1-201ENST00000508068 283 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 RN7SKP282-201ENST00000516824 299 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AP001804.3-201ENST00000525146 880 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 OR8I1P-201ENST00000529291 931 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AP001317.1-201ENST00000531194 960 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC007458.1-201ENST00000542812 373 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 RN7SL339P-201ENST00000580597 296 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MIR3922-201ENST00000585192 84 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 CCDC58P3-201ENST00000590792 430 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 PRELID3BP8-201ENST00000604148 295 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC009220.3-201ENST00000604318 586 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC073387.2-201ENST00000604797 784 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC010738.1-201ENST00000604970 987 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AC106028.5-201ENST00000610332 395 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AL020991.1-201ENST00000612314 373 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 AL512506.1-201ENST00000613918 449 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 CR392039.5-201ENST00000623201 510 ntBASIC2.75□□□□□ -1.97
CLN6Q9NWW5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLN6Q9NWW5 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 RPL9P7-201ENST00000330965 580 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 MIR181B1-201ENST00000385240 110 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC063979.1-201ENST00000415539 377 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 KRR1P1-201ENST00000419430 803 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 snoU109.4-201ENST00000458953 143 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 RNA5SP310-201ENST00000459084 116 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC104472.2-201ENST00000469035 601 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 SNORA31.1-201ENST00000515993 133 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 SNORA31.5-201ENST00000516190 133 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC023043.3-201ENST00000593113 385 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC005776.1-201ENST00000603164 290 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AP003973.1-201ENST00000604639 691 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC107871.2-201ENST00000612894 502 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC078880.5-201ENST00000617845 421 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AC091925.2-201ENST00000625059 256 ntBASIC2.74□□□□□ -1.97
CLN6Q9NWW5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLN6Q9NWW5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 RNU1-33P-201ENST00000364249 162 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 SNORA14A-201ENST00000364773 135 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms