Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 Z77249.1-201ENST00000444622 1175 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AL133477.1-201ENST00000457472 514 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 RPL21P103-201ENST00000479921 488 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 OR2A20P-203ENST00000498397 1268 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC026412.2-201ENST00000512270 1075 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 OR4A45P-201ENST00000529954 901 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC008127.2-201ENST00000549925 1075 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 OR4G1P-201ENST00000588632 938 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC025588.3-201ENST00000604182 274 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC009220.3-201ENST00000604318 586 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC116618.1-201ENST00000634617 774 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 Y_RNA.192-201ENST00000363977 102 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RNU6-356P-201ENST00000384140 107 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RNU6-1122P-201ENST00000384449 107 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 MT-TC-201ENST00000387405 66 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RAC1P3-201ENST00000416129 580 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RPS24P7-201ENST00000416921 246 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RPL31P45-201ENST00000419532 356 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC010099.3-201ENST00000423896 409 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RPS6P12-201ENST00000432491 726 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 COX7BP2-201ENST00000437976 242 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 FGF7P5-201ENST00000441829 291 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RPL12P26-201ENST00000452430 487 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 TRBV26-201ENST00000456572 344 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 KLRA1P-201ENST00000503499 986 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC005798.1-201ENST00000513715 387 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC016065.2-201ENST00000514530 444 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AP002404.1-201ENST00000532005 451 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 OR8L1P-201ENST00000534005 955 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC010198.2-201ENST00000550612 259 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 NBEAP1-201ENST00000554452 979 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC131235.4-201ENST00000609288 620 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC105429.2-201ENST00000610567 517 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC107075.1-201ENST00000613695 314 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC023158.2-201ENST00000614876 543 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC231759.1-201ENST00000616455 597 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC009159.2-201ENST00000617603 606 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC073348.1-201ENST00000623002 331 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC018692.3-201ENST00000623929 123 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AP000676.4-201ENST00000624659 623 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AC006927.4-201ENST00000639187 543 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF541Q9H0D2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AL008987.1-201ENST00000415528 237 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 RPL22P18-201ENST00000417197 377 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AL139421.1-201ENST00000423010 169 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 CKS1BP5-201ENST00000434172 273 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms