Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM55Q9BYV6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC108751.5-201ENST00000492880 1336 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 RNU6-451P-201ENST00000362921 107 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 SNORA72.1-201ENST00000363485 129 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 RNU4-48P-201ENST00000365559 182 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC004866.2-201ENST00000438285 481 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 CALM1P1-201ENST00000442082 433 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 DDX3P2-201ENST00000446138 111 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 MTND3P10-201ENST00000450967 341 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AL356010.1-201ENST00000456364 102 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC008481.1-201ENST00000463278 396 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC233702.1-201ENST00000482905 502 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 ENPP7P9-201ENST00000514456 627 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AP001646.1-201ENST00000527936 915 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC069307.1-201ENST00000602820 447 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 RNF138P2-201ENST00000603490 592 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AL049634.3-201ENST00000604968 457 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AP002799.1-201ENST00000623552 423 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 AC139713.2-215ENST00000641428 5037 ntBASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM55Q9BYV6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 RN7SKP103-201ENST00000363848 320 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 RNU5E-6P-201ENST00000365574 115 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 RNU6-641P-201ENST00000384006 107 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 MT-TL1-201ENST00000386347 75 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 OR4K12P-201ENST00000406538 961 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 MTATP6P16-201ENST00000434543 526 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC090774.1-201ENST00000435925 246 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 MTCO3P45-201ENST00000443036 613 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AL121871.1-201ENST00000443413 436 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 H2AFZP6-201ENST00000444403 394 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 CACYBPP2-201ENST00000453625 678 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 RN7SL860P-201ENST00000473738 223 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC020890.1-201ENST00000491837 504 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC026427.2-201ENST00000506228 536 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 SNORA20.3-201ENST00000516880 132 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC100870.1-201ENST00000522035 505 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AP000676.2-201ENST00000529711 301 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 HIF1AP1-201ENST00000553642 175 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 BNIP3P5-201ENST00000562290 498 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 BNIP3P30-201ENST00000601184 574 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 AC024940.5-201ENST00000622889 474 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 SAMMSON-226ENST00000642089 1582 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 SALL4P2-201ENST00000423288 2910 ntBASIC5.06□□□□□ -1.6
TRIM55Q9BYV6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms