Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RN7SKP125-201ENST00000410481 302 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU4-46P-201ENST00000410818 138 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU6-193P-201ENST00000410977 107 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RN7SKP140-201ENST00000411196 284 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNA5SP111-201ENST00000411386 101 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL356867.1-201ENST00000429623 299 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL031584.1-201ENST00000447169 754 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL162395.1-201ENST00000457882 422 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL049874.1-201ENST00000489560 388 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RN7SL808P-201ENST00000496066 299 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC010350.1-201ENST00000504908 231 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC091885.1-201ENST00000506658 268 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC005921.1-201ENST00000510589 286 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 MTND4P7-201ENST00000523876 130 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AP006587.4-201ENST00000526053 529 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AP004607.2-201ENST00000533949 322 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL670379.4-201ENST00000605279 254 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 Y_RNA.804-201ENST00000615262 101 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AL359547.2-201ENST00000615810 418 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC073869.8-201ENST00000641806 335 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC104964.3-201ENST00000606115 2860 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC104260.2-201ENST00000623551 3497 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 ABCC13-202ENST00000463099 3842 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 Y_RNA.70-201ENST00000362886 110 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 OR4K12P-201ENST00000406538 961 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 RPL30P2-201ENST00000414021 291 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC079809.1-201ENST00000415468 276 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 ARL5AP1-201ENST00000418991 388 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 FAR2P4-202ENST00000425399 584 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 HMGN2P27-201ENST00000427352 270 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 RPL21P8-201ENST00000465083 535 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 RN7SL97P-201ENST00000486780 299 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 MTCYBP18-201ENST00000501056 747 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC139783.2-201ENST00000504847 1145 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC092436.1-201ENST00000506450 503 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC010486.1-201ENST00000511793 424 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 RN7SKP60-201ENST00000516985 239 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 OR5B19P-201ENST00000531766 928 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC024940.3-201ENST00000538551 316 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC018638.8-201ENST00000588755 281 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC002545.1-201ENST00000592511 181 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AL138889.2-201ENST00000603883 242 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC012409.3-201ENST00000611343 981 ntBASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAIPQ9BWF2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.84□□□□□ -1.48
TRAIPQ9BWF2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.84□□□□□ -1.48
TRAIPQ9BWF2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
TRAIPQ9BWF2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.84□□□□□ -1.48
TRAIPQ9BWF2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.84□□□□□ -1.48
TRAIPQ9BWF2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRAIPQ9BWF2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 HSPE1P8-201ENST00000406997 288 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms