Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS1Q99742 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.96□□□□□ -1.78
NPAS1Q99742 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.96□□□□□ -1.78
NPAS1Q99742 DUXAP2-201ENST00000519198 589 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 AP003467.2-201ENST00000520175 319 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 AC022616.6-201ENST00000520479 119 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 AP003497.1-201ENST00000528472 562 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.96□□□□□ -1.78
NPAS1Q99742 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.96□□□□□ -1.78
NPAS1Q99742 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.96□□□□□ -1.78
NPAS1Q99742 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.96□□□□□ -1.78
NPAS1Q99742 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.96□□□□□ -1.78
NPAS1Q99742 RPL23AP97-201ENST00000568955 471 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 ZNF415P1-201ENST00000582279 1166 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS1Q99742 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS1Q99742 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS1Q99742 CKS1BP3-201ENST00000600888 237 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 AL356218.2-201ENST00000605264 187 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 NDUFA8P1-201ENST00000605525 367 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS1Q99742 MIR378J-201ENST00000611988 109 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.96□□□□□ -1.78
NPAS1Q99742 AC009159.1-201ENST00000618386 642 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 AL356585.4-201ENST00000623078 1229 ntBASIC3.96□□□□□ -1.78
NPAS1Q99742 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NPAS1Q99742 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.96□□□□□ -1.78
NPAS1Q99742 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPAS1Q99742 AC027514.1-201ENST00000588561 1603 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AL136964.1-201ENST00000622038 2990 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AC244517.1-201ENST00000606030 2086 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.95□□□□□ -1.78
NPAS1Q99742 RNA5SP509-201ENST00000364577 119 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPAS1Q99742 SNORD115.1-201ENST00000391109 76 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 RNU6-648P-201ENST00000410190 107 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 RNU6-712P-201ENST00000410558 100 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 MIR1911-201ENST00000410783 80 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 HMGN1P24-201ENST00000412282 298 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 C1DP2-201ENST00000418167 426 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AL137014.1-201ENST00000420490 1226 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 ISCA1P6-201ENST00000427740 390 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 BX890604.2-201ENST00000427883 474 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS1Q99742 RPL23AP25-201ENST00000430973 463 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 EZH2P1-201ENST00000431167 291 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS1Q99742 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.95□□□□□ -1.78
NPAS1Q99742 snoU13.3-201ENST00000459441 104 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 AC138853.1-201ENST00000503549 823 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS1Q99742 RNU6-798P-201ENST00000516912 103 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 RNU6-201P-201ENST00000517100 61 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC103783.1-201ENST00000520506 373 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.95□□□□□ -1.78
NPAS1Q99742 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AC123904.2-201ENST00000548059 300 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC107016.1-201ENST00000550463 337 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.95□□□□□ -1.78
NPAS1Q99742 HMGN1P30-201ENST00000589286 268 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC025165.5-201ENST00000602802 578 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC113403.1-201ENST00000604910 193 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC090578.1-201ENST00000604955 591 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC092354.2-201ENST00000607786 514 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AL161734.1-201ENST00000609720 557 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC109347.2-201ENST00000610220 349 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC091834.1-201ENST00000614543 472 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AC072046.2-201ENST00000618366 268 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AC002550.2-201ENST00000621246 394 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 AL445363.3-201ENST00000623080 671 ntBASIC3.95□□□□□ -1.78
NPAS1Q99742 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.95□□□□□ -1.78
NPAS1Q99742 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.95□□□□□ -1.78
NPAS1Q99742 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPAS1Q99742 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC009951.1-201ENST00000623674 2614 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 MTND4P5-201ENST00000435821 1374 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms