Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC125238.1-201ENST00000448842 249 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 RNU7-95P-201ENST00000459222 64 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 RN7SL297P-201ENST00000483161 293 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 AC091834.1-201ENST00000614543 472 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 MIR6766-201ENST00000622641 72 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 CU459211.1-201ENST00000635667 749 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 AC009487.2-201ENST00000420969 6821 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13AQ96RL7 AC008264.2-201ENST00000610193 3731 ntBASIC2.05□□□□□ -2.08
VPS13AQ96RL7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS13AQ96RL7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
VPS13AQ96RL7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS13AQ96RL7 Y_RNA.327-201ENST00000365201 102 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 RPS24P8-201ENST00000431490 402 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 RPS15AP17-201ENST00000470598 390 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC068305.1-201ENST00000497406 726 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC110588.1-201ENST00000559699 137 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AL451049.1-201ENST00000608672 497 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AL359198.2-201ENST00000611836 194 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 EI24P1-201ENST00000416584 867 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AL353597.2-202ENST00000434901 373 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC092991.1-201ENST00000477176 376 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 POU5F1P7-201ENST00000508759 541 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC092650.2-201ENST00000619984 902 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AL356489.2-201ENST00000566968 3528 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 RNY1-201ENST00000364228 113 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 MTND4LP16-201ENST00000440828 295 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.04□□□□□ -2.08
VPS13AQ96RL7 MIR6504-201ENST00000613520 61 ntBASIC2.04□□□□□ -2.08
VPS13AQ96RL7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 RPS7P2-201ENST00000435134 607 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 AC055876.1-202ENST00000567053 138 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 AC007620.3-201ENST00000608131 497 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 MIR6895-201ENST00000613497 78 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 CACYBPP1-201ENST00000438592 684 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 AC034244.1-201ENST00000507687 207 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 AC135279.1-201ENST00000543493 504 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.03□□□□□ -2.08
VPS13AQ96RL7 SNRPGP19-201ENST00000603826 189 ntBASIC2.03□□□□□ -2.08
VPS13AQ96RL7 RNA5SP502-201ENST00000362694 119 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AL133412.1-201ENST00000380194 2992 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AL390023.1-201ENST00000428836 262 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC117532.1-201ENST00000514638 323 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 RNA5SP76-201ENST00000516277 87 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 OR4R2P-201ENST00000530815 597 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AL731537.2-201ENST00000561565 951 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 OR4A45P-201ENST00000529954 901 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 MIR4644-201ENST00000579929 84 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 BX664608.1-201ENST00000610519 487 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AL121594.1-201ENST00000475906 575 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 HIGD1AP10-201ENST00000527837 282 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 AC068339.2-201ENST00000534395 618 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
VPS13AQ96RL7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS13AQ96RL7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13AQ96RL7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
VPS13AQ96RL7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.01□□□□□ -2.09
VPS13AQ96RL7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VPS13AQ96RL7 SNORA67.5-201ENST00000391036 107 ntBASIC2.01□□□□□ -2.09
VPS13AQ96RL7 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.01□□□□□ -2.09
VPS13AQ96RL7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms