Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC008782.1-201ENST00000603386 430 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AL365503.1-201ENST00000605247 905 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 HMGB1P50-201ENST00000605814 607 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC008966.2-201ENST00000606157 453 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RNU6-87P-201ENST00000607561 108 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC027287.1-201ENST00000553115 1453 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX18Q96RF0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC090971.4-201ENST00000560291 1800 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX18Q96RF0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC092447.10-201ENST00000620607 1652 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 SDHCP2-201ENST00000398565 501 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 RPS4XP9-201ENST00000405151 780 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 BX510359.2-201ENST00000417920 305 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 PIGFP2-201ENST00000421400 651 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC008065.1-201ENST00000428525 348 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 MTCYBP45-201ENST00000435243 565 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AL121601.2-201ENST00000438019 707 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 ISCUP1-201ENST00000454451 448 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AP001992.1-205ENST00000462248 379 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 RN7SL354P-201ENST00000469282 294 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 RPL36AP41-201ENST00000493820 306 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC069439.1-201ENST00000494739 167 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 CEACAMP10-202ENST00000495431 496 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 HMGB1P21-201ENST00000502313 581 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 ARL4AP2-201ENST00000507378 601 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC105914.1-201ENST00000511798 226 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC010493.1-201ENST00000513479 292 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AL110118.1-201ENST00000553543 400 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC105129.1-201ENST00000560250 297 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC234771.5-201ENST00000600161 514 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC245014.2-201ENST00000603689 287 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AL009028.1-201ENST00000604895 802 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC246785.4-201ENST00000605374 287 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 LARP7P1-201ENST00000605576 316 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC055876.5-201ENST00000605667 259 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC011816.2-201ENST00000607089 556 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 OR10AB1P-201ENST00000609613 938 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AL161734.1-201ENST00000609720 557 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC012409.3-201ENST00000611343 981 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC006338.1-201ENST00000618453 749 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC233309.1-201ENST00000619522 751 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AP000346.3-201ENST00000622821 210 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC010149.2-201ENST00000637608 315 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX18Q96RF0 AC006971.1-201ENST00000407916 4486 ntBASIC4.14□□□□□ -1.75
SNX18Q96RF0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX18Q96RF0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 NUP58P1-201ENST00000502546 1738 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC092125.1-201ENST00000562568 1995 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 RNY4P14-201ENST00000363656 96 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 RNA5SP505-201ENST00000364748 108 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 RNU6-730P-201ENST00000383954 104 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 Y_RNA.402-201ENST00000383972 102 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC119751.6-201ENST00000416712 186 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC140479.3-201ENST00000418944 1126 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX18Q96RF0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 TIMM9P3-201ENST00000428659 274 ntBASIC4.13□□□□□ -1.75
SNX18Q96RF0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX18Q96RF0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms