Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 AC025048.6-202ENST00000627667 438 ntBASIC4.18□□□□□ -1.74
TRAPPC9Q96Q05 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.18□□□□□ -1.74
TRAPPC9Q96Q05 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.18□□□□□ -1.74
TRAPPC9Q96Q05 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRAPPC9Q96Q05 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRAPPC9Q96Q05 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 Y_RNA.51-201ENST00000362725 102 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RNY4P24-201ENST00000362735 96 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RNU6-97P-201ENST00000363387 104 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RN7SKP44-201ENST00000363602 316 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 Y_RNA.201-201ENST00000364052 96 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RNA5SP175-201ENST00000364275 119 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RNA5SP515-201ENST00000364570 118 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 RPL17P12-201ENST00000413391 526 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC016907.1-201ENST00000419483 435 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 FAM103A2P-201ENST00000444122 354 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL360221.1-201ENST00000445989 335 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 NUTF2P3-201ENST00000448540 384 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 SNRPGP9-201ENST00000456025 225 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 UQCRHP4-201ENST00000471686 272 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC105137.1-201ENST00000484355 562 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC068305.1-201ENST00000497406 726 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC116347.2-201ENST00000514912 523 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 Vault.1-201ENST00000516474 102 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 MIR2116-201ENST00000517221 80 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 CYCSP29-201ENST00000533731 318 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC022916.3-201ENST00000592961 742 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC073544.2-201ENST00000601155 540 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC128687.1-201ENST00000605304 619 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC068276.1-201ENST00000605793 379 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL021997.2-201ENST00000615674 271 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC027807.2-201ENST00000616099 408 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 ZYXP1-201ENST00000617638 118 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL445567.2-201ENST00000618935 498 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL356585.4-201ENST00000623078 1229 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 MIR3653-201ENST00000625572 110 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 AL390237.1-201ENST00000404226 1415 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 NOL8P1-201ENST00000508336 3529 ntBASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC9Q96Q05 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 CCT4P2-201ENST00000233836 1548 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RNU4-91P-201ENST00000364778 135 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RNU6-712P-201ENST00000410558 100 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RNU2-47P-201ENST00000410649 186 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 Z97055.1-201ENST00000419730 712 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 OR8F1P-201ENST00000425243 930 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RPL23AP89-201ENST00000439324 255 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AL512326.1-201ENST00000443050 721 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 ABCF2P2-201ENST00000450549 296 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 Z82190.1-201ENST00000454534 490 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RNA5SP269-201ENST00000459032 137 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 PPIAP15-201ENST00000479662 484 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AC006517.1-201ENST00000480485 328 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RPL35P6-201ENST00000490024 372 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RN7SL691P-201ENST00000494487 301 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 MRPL49P2-201ENST00000521066 465 ntBASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.16□□□□□ -1.74
TRAPPC9Q96Q05 RPL23AP97-201ENST00000568955 471 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms