Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 MTND5P23-201ENST00000430812 1655 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 RNA5SP502-201ENST00000362694 119 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AC091953.2-201ENST00000623979 160 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 RNA5SP38-201ENST00000410750 119 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 RPL36AP6-201ENST00000435770 321 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 BMS1P7-201ENST00000602440 1052 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 AL049840.6-202ENST00000603373 279 ntBASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.83□□□□□ -2.12
CSMD1Q96PZ7 RNU6-1-201ENST00000383898 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-42P-201ENST00000384165 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-36P-201ENST00000384172 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-4P-201ENST00000384205 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-5P-201ENST00000384238 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-3P-201ENST00000384314 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-2-201ENST00000384627 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-9-201ENST00000384776 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-33P-201ENST00000384793 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC004965.1-201ENST00000413033 213 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AL354943.1-201ENST00000572103 781 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 RNU6-6P-201ENST00000606623 107 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC069234.5-201ENST00000611056 416 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 MIR219B-201ENST00000637023 88 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC009487.2-201ENST00000420969 6821 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 MLLT10P2-201ENST00000506434 249 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC055876.1-202ENST00000567053 138 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC002543.1-201ENST00000299783 1954 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 MTCO2P17-201ENST00000424336 677 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AL450263.2-201ENST00000439400 589 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 HMGB1P41-201ENST00000520234 440 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 SUB1P3-201ENST00000564581 315 ntBASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.82□□□□□ -2.12
CSMD1Q96PZ7 AC233981.2-201ENST00000611524 1614 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 CDC27P2-201ENST00000425026 1922 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 AL451074.6-201ENST00000608512 729 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 DCAF13P1-201ENST00000495256 1330 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 ASNSP4-201ENST00000511103 447 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 AP005901.5-201ENST00000545779 1796 ntBASIC1.81□□□□□ -2.12
CSMD1Q96PZ7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC009969.1-201ENST00000438726 172 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 RNU7-95P-201ENST00000459222 64 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AL359198.2-201ENST00000611836 194 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 MTND4P35-201ENST00000604257 1375 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 RNU1-57P-201ENST00000384491 166 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 RNU2-6P-201ENST00000411404 190 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 OR5D17P-201ENST00000531492 978 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC096720.1-201ENST00000604441 183 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC084035.1-201ENST00000634543 607 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms