Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RNU6-179P-201ENST00000363350 107 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RNA5SP507-201ENST00000363603 121 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.202-201ENST00000364083 110 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.216-201ENST00000364205 93 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RNA5SP223-201ENST00000365174 120 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MIR765-201ENST00000390226 114 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 SNORA48.4-201ENST00000391089 134 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL136372.1-201ENST00000403060 228 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MIR1182-201ENST00000408363 97 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC068533.1-201ENST00000418542 415 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 Z80107.2-201ENST00000445127 392 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 PRPS1P1-201ENST00000445305 876 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC016696.1-201ENST00000446949 318 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 FGF7P3-201ENST00000454645 303 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 SNRPFP3-201ENST00000457792 225 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.635-201ENST00000459041 101 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC108161.1-201ENST00000461060 402 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RPS20P21-201ENST00000466859 343 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 VN1R17P-201ENST00000472048 1090 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RNU6-27P-201ENST00000516146 107 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RNU6-864P-201ENST00000516256 108 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 Y_RNA.718-201ENST00000517110 102 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC027308.1-201ENST00000517993 110 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL118558.2-201ENST00000556294 238 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MIR3671-201ENST00000580455 88 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC007448.1-201ENST00000582714 234 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC006116.3-201ENST00000592968 361 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 SNRPGP17-201ENST00000603780 214 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AL451044.1-201ENST00000604867 238 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 CTHRC1P1-201ENST00000605383 469 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC080078.3-201ENST00000605407 463 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC133644.2-201ENST00000608142 540 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 uc_338.34-201ENST00000617467 174 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC118658.2-201ENST00000618697 459 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC091925.2-201ENST00000625059 256 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 U6.114-201ENST00000636407 96 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MTND4P14-201ENST00000435799 1354 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AC007529.1-201ENST00000418574 2178 ntBASIC4.87□□□□□ -1.63
PTCHD1Q96NR3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC090971.4-201ENST00000560291 1800 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 SNORA70-201ENST00000384436 135 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 SNORD116-29-201ENST00000384516 83 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RNU6-1160P-201ENST00000384546 104 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RNU6-146P-201ENST00000384602 108 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ENSAP1-201ENST00000392855 326 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RPL5P18-201ENST00000406671 891 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RNU2-36P-201ENST00000410361 191 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RN7SKP213-201ENST00000410746 298 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms