Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL389915.1-201ENST00000422463 466 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 MTATP6P4-201ENST00000427725 675 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 RPS11P1-201ENST00000451072 473 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 RN7SL271P-201ENST00000487601 295 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC008953.1-201ENST00000497334 318 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC006499.5-201ENST00000505037 514 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 BTF3P13-201ENST00000513224 490 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC118465.1-201ENST00000513820 1271 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC026801.2-201ENST00000515352 425 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 NARSP2-201ENST00000518524 679 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC125611.2-201ENST00000551907 647 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 MIR7155-201ENST00000615925 56 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC007546.1-201ENST00000619452 559 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC091931.1-201ENST00000623488 728 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 IPO8P1-201ENST00000455509 3109 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AP002001.2-201ENST00000529025 1469 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 SDAD1P1-202ENST00000524156 2051 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.65□□□□□ -1.82
CMTM3Q96MX0 AC092125.1-201ENST00000562568 1995 ntBASIC3.65□□□□□ -1.82
CMTM3Q96MX0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
CMTM3Q96MX0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CMTM3Q96MX0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CMTM3Q96MX0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CMTM3Q96MX0 AC073429.2-201ENST00000569694 1444 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 RNU6-754P-201ENST00000391166 107 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 MED14P1-201ENST00000430517 648 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 MTND1P30-201ENST00000441241 901 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 RPL23AP81-201ENST00000455252 467 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 RN7SL610P-201ENST00000463845 291 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 RN7SL329P-201ENST00000467740 299 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 MTND3P7-201ENST00000474435 343 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC108860.1-201ENST00000484521 383 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 NDUFB5P1-201ENST00000508134 564 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC010342.1-201ENST00000514047 877 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC116347.2-201ENST00000514912 523 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 RNA5SP143-201ENST00000516936 115 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL391156.1-201ENST00000554965 554 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 ROCK1P1-201ENST00000573767 549 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 TPMTP1-201ENST00000592307 737 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 Z99497.2-201ENST00000603634 310 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC121247.2-201ENST00000604776 136 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AC018445.2-201ENST00000622987 260 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 AL136164.4-201ENST00000625013 2135 ntBASIC3.65□□□□□ -1.83
CMTM3Q96MX0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CMTM3Q96MX0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.64□□□□□ -1.83
CMTM3Q96MX0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CMTM3Q96MX0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
CMTM3Q96MX0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CMTM3Q96MX0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CMTM3Q96MX0 PABPC1P9-201ENST00000426076 1612 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms