Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 VDAC1P3-201ENST00000434069 851 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AL132765.1-201ENST00000434165 553 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC092641.1-201ENST00000440229 772 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 RAC1P7-201ENST00000445367 377 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AL592447.1-201ENST00000447592 540 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 PDSS1P2-201ENST00000449397 678 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 MTCO2P18-201ENST00000457151 658 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RPL21P126-201ENST00000470049 478 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC055855.1-201ENST00000489563 579 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 RN7SL812P-201ENST00000493791 279 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC139783.2-201ENST00000504847 1145 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RFPL1S-203ENST00000539579 330 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 CBX3P5-201ENST00000552017 521 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC024909.2-201ENST00000553035 286 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 BNIP3P8-201ENST00000597863 560 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC090582.1-201ENST00000636321 199 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 LINC02471-203ENST00000641941 4752 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC138Q96M89 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC116096.1-201ENST00000566804 2314 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 RNU6-173P-201ENST00000364215 104 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 MIR129-1-201ENST00000384972 72 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 U3.22-201ENST00000391120 215 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 RN7SKP56-201ENST00000410513 331 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 RPS20P14-201ENST00000412545 360 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL353777.1-201ENST00000425552 326 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 RPEP2-201ENST00000432149 701 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 RPL35AP22-201ENST00000436855 335 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 RPL7P28-201ENST00000437739 740 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 SSXP1-201ENST00000453640 473 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC106872.2-201ENST00000494303 480 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 BNIP3P41-201ENST00000503774 571 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC026801.2-201ENST00000515352 425 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC105233.3-201ENST00000531125 744 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC135279.1-201ENST00000543493 504 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 MIR4715-201ENST00000584117 79 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC005771.1-201ENST00000585581 349 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 RSL24D1P11-201ENST00000591045 491 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC079587.1-201ENST00000603846 277 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC011468.4-201ENST00000603942 409 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC064872.1-201ENST00000604823 1072 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL160290.3-201ENST00000604869 165 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 Z98200.1-201ENST00000607298 470 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL355472.4-201ENST00000610233 626 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC012409.3-201ENST00000611343 981 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 uc_338.32-201ENST00000615087 172 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL138721.1-201ENST00000616756 179 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC009159.1-201ENST00000618386 642 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AL590240.3-201ENST00000621416 943 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC010149.2-201ENST00000637608 315 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 TAB3P1-202ENST00000452645 1634 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AC008725.1-201ENST00000605123 2263 ntBASIC4.3□□□□□ -1.72
CCDC138Q96M89 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms