Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PKNOX2Q96KN3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PKNOX2Q96KN3 MTND5P11-201ENST00000511037 1812 ntBASIC3.4□□□□□ -1.86
PKNOX2Q96KN3 RPL23AP57-201ENST00000332361 466 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 RNU6-543P-201ENST00000362576 108 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 RNU6-989P-201ENST00000362756 107 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 RPL32P23-201ENST00000397237 405 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 PNRC2P1-201ENST00000423940 420 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 RPL7P44-201ENST00000424827 742 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AL358075.3-201ENST00000426289 226 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 MTCO3P43-201ENST00000440974 771 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC068135.1-201ENST00000446164 246 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC114755.5-201ENST00000447760 831 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC108729.2-201ENST00000476543 840 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP402-201ENST00000517148 110 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC090136.1-201ENST00000520009 240 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 OR1M4P-201ENST00000589199 287 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC018926.3-201ENST00000618841 406 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 Z99129.2-201ENST00000619967 314 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 MIR6830-201ENST00000636015 70 ntBASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX2Q96KN3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP197-201ENST00000363357 119 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 RNU6-461P-201ENST00000364195 107 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 SNORD3H-201ENST00000384486 214 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 UBE2V1P15-201ENST00000407776 448 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP44-201ENST00000410446 133 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 HMGB3P31-201ENST00000413333 595 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AL365496.1-201ENST00000426885 215 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 VN1R34P-201ENST00000447387 883 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC133134.1-201ENST00000466800 359 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 RPS27P26-201ENST00000494583 239 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC002456.2-201ENST00000509356 380 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 BTF3P12-201ENST00000519620 469 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 MED28P6-201ENST00000558776 231 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 TPMTP1-201ENST00000592307 737 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC125494.3-201ENST00000602759 455 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 STMN1P1-201ENST00000617809 440 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 MIR6758-201ENST00000620653 63 ntBASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.39□□□□□ -1.87
PKNOX2Q96KN3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC022336.2-201ENST00000568966 2538 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC131280.1-202ENST00000624067 4211 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AL589826.1-201ENST00000340697 249 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC016712.1-201ENST00000431088 378 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 COX6CP12-201ENST00000446748 202 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 OR5G4P-201ENST00000525251 760 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 COX6CP5-201ENST00000527162 228 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC126177.3-201ENST00000551839 688 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 PRELID2P1-201ENST00000552837 301 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC027104.1-201ENST00000563702 681 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC010546.1-201ENST00000569391 485 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC011260.1-201ENST00000578420 472 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms