Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AP003122.6-201ENST00000623831 495 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 LINC02211-204ENST00000642024 1070 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VMP1Q96GC9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VMP1Q96GC9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC005539.1-201ENST00000443768 1479 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
VMP1Q96GC9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VMP1Q96GC9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VMP1Q96GC9 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AL050321.1-201ENST00000432363 400 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 MTCYBP45-201ENST00000435243 565 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 THAP5P1-201ENST00000439089 262 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 RPS29P31-201ENST00000446147 164 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC011260.1-201ENST00000578420 472 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 MIR4425-201ENST00000580572 84 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 BNIP3P26-201ENST00000600827 554 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AL390208.1-201ENST00000605885 644 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC004832.5-201ENST00000608677 401 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC091046.2-201ENST00000620775 665 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC008568.2-201ENST00000623862 2313 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
VMP1Q96GC9 CEP170P1-201ENST00000502249 4587 ntBASIC3.62□□□□□ -1.83
VMP1Q96GC9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AL079343.1-201ENST00000572358 1771 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC006504.1-201ENST00000562493 3666 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 RNU5E-10P-201ENST00000363506 118 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC025750.1-201ENST00000399891 379 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 HLFP1-201ENST00000402375 499 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AL391417.1-201ENST00000404100 426 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 RN7SKP202-201ENST00000410439 330 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 RN7SKP159-201ENST00000410657 292 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 RPS15AP6-201ENST00000420703 385 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 MTCO2P25-201ENST00000447065 681 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC093392.2-201ENST00000450682 337 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC234775.1-201ENST00000454247 670 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AL049714.1-201ENST00000466686 347 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 RPL31P60-201ENST00000478450 367 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 RPL21P131-201ENST00000497298 483 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC026784.1-201ENST00000507986 352 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 RNA5SP164-201ENST00000516533 110 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 AL109618.2-201ENST00000605527 211 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC019176.2-201ENST00000611579 315 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC005344.1-201ENST00000613391 459 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 FP236240.3-201ENST00000623061 327 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC073530.2-201ENST00000623987 261 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 AC231657.1-201ENST00000624313 397 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
VMP1Q96GC9 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.61□□□□□ -1.83
VMP1Q96GC9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VMP1Q96GC9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms