Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC060771.1-201ENST00000582031 164 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC004853.1-201ENST00000604902 698 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AL356218.2-201ENST00000605264 187 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC011816.2-201ENST00000607089 556 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 Z98200.1-201ENST00000607298 470 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC092954.2-201ENST00000609103 430 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 MLECP1-201ENST00000615893 709 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AL732618.1-201ENST00000623251 301 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 BMS1P21-201ENST00000634565 365 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 LRRC77P-213ENST00000637727 880 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC139713.2-215ENST00000641428 5037 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 Y_RNA.1-201ENST00000352915 104 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 RNY1P12-201ENST00000364251 105 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 Y_RNA.573-201ENST00000384763 105 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 U3.22-201ENST00000391120 215 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 CCNG1P1-201ENST00000406783 885 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 MIR1277-201ENST00000408536 78 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 SNRPFP1-201ENST00000414761 252 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AL732292.1-201ENST00000426692 226 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC000111.3-201ENST00000433478 193 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC104850.1-201ENST00000435940 476 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC132479.1-201ENST00000449160 144 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 RPL37P6-202ENST00000464216 403 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC092989.1-201ENST00000481235 277 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 RPS3AP14-201ENST00000483907 780 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC010587.1-201ENST00000505809 469 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC021146.3-201ENST00000511911 260 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 OR5AQ1P-201ENST00000527596 927 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC009643.1-201ENST00000532030 391 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 MIR3118-1-201ENST00000581787 76 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC090948.1-201ENST00000607464 549 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 uc_338.13-201ENST00000618243 179 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AP000843.1-201ENST00000624880 701 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 MIR3688-2-201ENST00000636963 87 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AC244258.1-201ENST00000637553 1071 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 AL359893.1-201ENST00000447628 1580 ntBASIC4.09□□□□□ -1.75
CTHRC1Q96CG8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 AC009902.3-201ENST00000606235 2172 ntBASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CTHRC1Q96CG8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RNA5SP447-201ENST00000363749 119 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 Y_RNA.402-201ENST00000383972 102 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 MIR708-201ENST00000390708 88 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 U3.29-201ENST00000391296 212 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 CALM2P3-201ENST00000400429 449 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RPS20P14-201ENST00000412545 360 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 MTND3P17-201ENST00000416968 344 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RPS27AP12-201ENST00000429552 465 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms