Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SKA1Q96BD8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.11□□□□□ -1.75
SKA1Q96BD8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SKA1Q96BD8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.11□□□□□ -1.75
SKA1Q96BD8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SKA1Q96BD8 AC091152.2-201ENST00000591628 2569 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SKA1Q96BD8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC090740.1-201ENST00000623193 2262 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SKA1Q96BD8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 RNU6-462P-201ENST00000362659 105 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 MIR23A-201ENST00000385245 73 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 RN7SKP53-201ENST00000411337 315 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AL008987.1-201ENST00000415528 237 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 RPL22P18-201ENST00000417197 377 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 MTCO2P21-201ENST00000419780 677 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC087650.1-201ENST00000431445 468 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 ATP5HP2-201ENST00000433885 485 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC024082.2-201ENST00000434771 238 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 HMGN2P20-201ENST00000437531 273 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 RPS29P7-201ENST00000439662 171 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC010655.1-201ENST00000449336 292 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 RPL23AP35-201ENST00000451906 501 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 RPS27AP1-201ENST00000475545 471 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC108860.1-201ENST00000484521 383 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 CBX3P3-201ENST00000508108 532 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 RNU6-528P-201ENST00000516926 100 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AP001372.4-201ENST00000524889 472 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC120057.2-201ENST00000571520 271 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC025588.2-201ENST00000604851 466 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 TUSC7.1-201ENST00000610969 165 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AL136981.2-201ENST00000617319 734 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 XIST_intron.1-201ENST00000619444 68 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 MIR6075-201ENST00000620782 95 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 PLCE1P1-201ENST00000622094 305 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 MIR6500-201ENST00000622700 86 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 OR8B1P-202ENST00000641132 1178 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AL513185.3-201ENST00000433335 1300 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC138915.3-201ENST00000562908 1389 ntBASIC4.1□□□□□ -1.75
SKA1Q96BD8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SKA1Q96BD8 AC009812.4-201ENST00000569134 1805 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC118273.1-201ENST00000525324 3006 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC116667.1-201ENST00000604855 2072 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SKA1Q96BD8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SKA1Q96BD8 RPL7P26-201ENST00000333817 754 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 RNU4-28P-201ENST00000364739 141 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SKA1Q96BD8 MIR670-201ENST00000390142 98 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AL590704.1-201ENST00000402856 794 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 RPS24P7-201ENST00000416921 246 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AL691449.1-201ENST00000426570 421 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AL365396.1-201ENST00000430854 671 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 MTND1P32-201ENST00000433043 938 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 SNRPEP4-201ENST00000435815 279 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 THAP5P1-201ENST00000439089 262 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 EEF1E1P1-201ENST00000446998 430 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC091564.1-201ENST00000464563 479 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 RPL29P14-201ENST00000495837 428 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC010342.1-201ENST00000514047 877 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 IGKV2-23-201ENST00000518729 323 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 PDCL2P2-201ENST00000533651 189 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms