Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC006378.2-201ENST00000623178 2476 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RTF1Q92541 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RTF1Q92541 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC068254.2-201ENST00000623938 3577 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RTF1Q92541 RNA5SP97-201ENST00000365006 84 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTF1Q92541 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.19□□□□□ -1.58
RTF1Q92541 SNORA48.7-201ENST00000391302 135 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 MTND1P21-201ENST00000412991 285 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 Z97055.1-201ENST00000419730 712 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC099336.2-201ENST00000422457 254 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AL022238.1-201ENST00000442557 355 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 Z95327.1-201ENST00000446082 482 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.19□□□□□ -1.58
RTF1Q92541 NANOGNBP1-201ENST00000448444 480 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC099560.2-201ENST00000457554 255 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC026410.2-201ENST00000460281 156 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC105252.1-201ENST00000503089 286 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC022447.3-201ENST00000506865 495 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTF1Q92541 AC006499.6-201ENST00000511169 607 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC018797.3-201ENST00000513388 1241 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 RNU6-506P-201ENST00000516553 94 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC013828.2-201ENST00000532487 235 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.19□□□□□ -1.58
RTF1Q92541 AC008127.2-201ENST00000549925 1075 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AL133241.1-201ENST00000556832 487 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.19□□□□□ -1.58
RTF1Q92541 TPRKBP2-201ENST00000565969 475 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC022968.1-201ENST00000567372 442 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.19□□□□□ -1.58
RTF1Q92541 MIR4307-201ENST00000582802 84 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.19□□□□□ -1.58
RTF1Q92541 AL359535.1-201ENST00000612100 1087 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 AC091834.1-201ENST00000614543 472 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.19□□□□□ -1.58
RTF1Q92541 AL122126.1-201ENST00000546905 1318 ntBASIC5.19□□□□□ -1.58
RTF1Q92541 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTF1Q92541 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 AL121834.1-202ENST00000404494 277 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 MIR320C1-201ENST00000408566 88 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.18□□□□□ -1.58
RTF1Q92541 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 RPS3AP9-201ENST00000417027 792 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 AC007389.2-201ENST00000434630 306 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 AC098824.1-201ENST00000453565 980 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 AC017015.1-201ENST00000477387 286 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 FAM172BP-201ENST00000487497 1089 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 RN7SL323P-201ENST00000494712 295 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AL358832.1-201ENST00000497800 389 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.18□□□□□ -1.58
RTF1Q92541 AC104986.1-201ENST00000517978 436 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 HSPA8P13-201ENST00000523715 472 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC022878.1-201ENST00000530684 149 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.18□□□□□ -1.58
RTF1Q92541 YPEL5P3-201ENST00000547227 352 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 LSM6P2-201ENST00000552208 177 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 MIR544B-201ENST00000582372 78 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 OR4G1P-201ENST00000588632 938 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 AL606834.2-201ENST00000602954 668 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 HSPE1P14-201ENST00000605812 302 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 AL513477.2-201ENST00000607858 568 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 AC116447.1-201ENST00000613153 453 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 OR5AK4P-201ENST00000635912 903 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 ASNSP1-201ENST00000518311 1939 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.18□□□□□ -1.58
RTF1Q92541 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.18□□□□□ -1.58
RTF1Q92541 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
RTF1Q92541 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.18□□□□□ -1.58
RTF1Q92541 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTF1Q92541 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms