Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NEDD1Q8NHV4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEDD1Q8NHV4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
NEDD1Q8NHV4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC121333.1-201ENST00000567488 2709 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 RNU6-251P-201ENST00000363235 104 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 Y_RNA.270-201ENST00000364693 104 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 Y_RNA.506-201ENST00000384494 102 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RNU6-713P-201ENST00000384761 107 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RNU6-328P-201ENST00000390887 106 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RPL7P60-201ENST00000397636 735 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 HMGB1P17-201ENST00000403495 628 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 MIR1302-6-201ENST00000408466 90 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 MIR1252-201ENST00000408861 65 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC092832.1-201ENST00000422934 400 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 BX323845.1-201ENST00000432417 179 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC011816.1-201ENST00000441346 546 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 FTH1P25-201ENST00000447665 469 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 RN7SL443P-201ENST00000464331 290 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RPL31P50-201ENST00000471002 296 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 COX6B1P5-201ENST00000509843 249 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RNU6-470P-201ENST00000515954 104 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RNU6-120P-201ENST00000516077 103 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 RNU4-77P-201ENST00000516692 156 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC090136.1-201ENST00000520009 240 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 IGHV3-76-201ENST00000522465 295 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC023043.2-201ENST00000589678 1026 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC105254.2-201ENST00000603636 436 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC104763.2-201ENST00000604179 382 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC127459.3-201ENST00000624328 466 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 EEF1A1P36-201ENST00000427807 1351 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AP005432.1-201ENST00000580891 3485 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 INTS6P1-201ENST00000504674 2530 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NEDD1Q8NHV4 XPOTP1-201ENST00000443317 2398 ntBASIC6□□□□□ -1.45
NEDD1Q8NHV4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6□□□□□ -1.45
NEDD1Q8NHV4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC011755.1-201ENST00000623763 2049 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC007996.1-201ENST00000620414 2821 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 Y_RNA.26-201ENST00000362539 101 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RNU6-490P-201ENST00000362985 107 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 SNORD113-7-201ENST00000363762 77 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RNA5SP428-201ENST00000365129 132 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RNA5SP223-201ENST00000365174 120 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 Y_RNA.464-201ENST00000384282 110 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 UBE2V1P2-201ENST00000397758 440 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RPS20P5-201ENST00000434808 360 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 TMSB4XP3-201ENST00000445144 114 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RPS27AP15-201ENST00000447672 466 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RPL31P44-201ENST00000447680 377 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AL935212.3-201ENST00000450729 284 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RN7SL244P-201ENST00000493405 297 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC067942.3-201ENST00000512025 362 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC097486.1-201ENST00000515331 210 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 RNA5SP43-201ENST00000516559 110 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC091905.4-201ENST00000623432 202 ntBASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEDD1Q8NHV4 AC068870.3-201ENST00000625077 2536 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms