Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MFSD8-245ENST00000641743 948 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LARP7P4-201ENST00000481075 878 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SRIP1-201ENST00000489235 288 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 RN7SKP24-201ENST00000515888 284 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 YWHAZP1-201ENST00000556286 722 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 VN1R81P-201ENST00000602085 372 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL591516.1-201ENST00000611326 274 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 MIR6845-201ENST00000613182 61 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC004943.3-201ENST00000624116 600 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SNORA25.6-201ENST00000364121 118 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 OR5H5P-201ENST00000503164 928 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 ENSA-210ENST00000503241 574 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC022790.1-201ENST00000522872 204 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC012119.1-201ENST00000603184 222 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL590808.1-201ENST00000618696 141 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LRRC77P-213ENST00000637727 880 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 CASP3-203ENST00000393588 677 ntTSL 4 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL138827.1-201ENST00000402666 306 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SEC63P1-201ENST00000425785 1258 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC016542.2-201ENST00000624201 619 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 GABPAP-201ENST00000419271 1356 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 MIR337-201ENST00000362281 93 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 Y_RNA.116-201ENST00000363292 103 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 RANP3-201ENST00000530970 276 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SNRPGP18-201ENST00000553000 214 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AP003117.2-201ENST00000606010 545 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC090115.4-201ENST00000609970 188 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL356266.1-201ENST00000623311 483 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 USP9YP6-201ENST00000413550 854 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL606490.7-201ENST00000433136 191 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 TAF9P1-201ENST00000445421 515 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 USP9YP34-201ENST00000453983 808 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC006539.3-201ENST00000454258 129 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 TAF9P2-201ENST00000454958 515 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC138649.5-201ENST00000637456 137 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 Z82209.1-201ENST00000422141 2135 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 SNORD65-201ENST00000391079 73 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 AC073464.3-201ENST00000422564 712 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 RPS27P5-201ENST00000444247 244 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE1Q8NF91 CR381653.2-201ENST00000624041 768 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 HSP90AA5P-201ENST00000438353 2192 ntBASIC0.76□□□□□ -2.29
SYNE1Q8NF91 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 U8.13-201ENST00000390842 128 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL353898.1-201ENST00000444055 238 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC010198.2-201ENST00000550612 259 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 CFTRP2-201ENST00000634304 199 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC091564.4-201ENST00000533934 2194 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC090071.1-201ENST00000507713 644 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 682.2 ms