Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DPH3P2-201ENST00000422618 250 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 RPL36AP6-201ENST00000435770 321 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AL603825.1-201ENST00000438481 80 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC025423.2-201ENST00000537570 439 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RTL9Q8NET4 YWHAZP1-201ENST00000556286 722 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 LLPHP1-201ENST00000603571 367 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC025811.1-201ENST00000604312 472 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 RNA5SP108-201ENST00000605921 117 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AP003117.2-201ENST00000606010 545 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AC025754.2-201ENST00000606491 432 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 AL627309.6-201ENST00000606857 840 ntBASIC2.94□□□□□ -1.94
RTL9Q8NET4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
RTL9Q8NET4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RTL9Q8NET4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AL024474.1-201ENST00000404655 591 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 MTCO3P21-201ENST00000430791 643 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC109583.1-201ENST00000432156 268 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 HMGB1P12-201ENST00000438594 598 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC069277.2-201ENST00000454211 432 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 RPS20P22-201ENST00000473700 357 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 OR4G11P-201ENST00000492842 939 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC015712.3-201ENST00000559380 164 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC061975.8-201ENST00000587058 721 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 NTAN1P1-201ENST00000603150 646 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.93□□□□□ -1.94
RTL9Q8NET4 AL136164.4-201ENST00000625013 2135 ntBASIC2.93□□□□□ -1.94
RTL9Q8NET4 AC110792.3-201ENST00000595906 1614 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL9Q8NET4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 AC096638.1-201ENST00000444678 216 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 RNU6-991P-201ENST00000516168 107 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 OR5BN1P-201ENST00000532955 829 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.92□□□□□ -1.94
RTL9Q8NET4 AC099063.3-201ENST00000642066 185 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RTL9Q8NET4 AL157700.1-201ENST00000561973 1432 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL9Q8NET4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL9Q8NET4 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.92□□□□□ -1.94
RTL9Q8NET4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RTL9Q8NET4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RTL9Q8NET4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RTL9Q8NET4 RPL21P132-201ENST00000331267 462 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 FAM133CP-201ENST00000332869 704 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 SNORD114-1-201ENST00000362705 72 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.91□□□□□ -1.94
RTL9Q8NET4 AC018634.1-201ENST00000437554 401 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 RPL30P9-201ENST00000465586 330 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.91□□□□□ -1.94
RTL9Q8NET4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RTL9Q8NET4 HMGB1P41-201ENST00000520234 440 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 AP001317.1-201ENST00000531194 960 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.91□□□□□ -1.94
RTL9Q8NET4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.91□□□□□ -1.94
RTL9Q8NET4 AC090617.7-201ENST00000623952 126 ntBASIC2.91□□□□□ -1.94
RTL9Q8NET4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.91□□□□□ -1.94
RTL9Q8NET4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RTL9Q8NET4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
RTL9Q8NET4 AL591416.1-201ENST00000404015 867 ntBASIC2.9□□□□□ -1.94
RTL9Q8NET4 FAT1P1-201ENST00000406588 507 ntBASIC2.9□□□□□ -1.94
RTL9Q8NET4 HSPE1P1-201ENST00000421494 318 ntBASIC2.9□□□□□ -1.94
RTL9Q8NET4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RTL9Q8NET4 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.94
RTL9Q8NET4 RPL9P6-201ENST00000492764 598 ntBASIC2.9□□□□□ -1.94
RTL9Q8NET4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RTL9Q8NET4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.9□□□□□ -1.94
RTL9Q8NET4 DEFB122-202ENST00000569013 197 ntBASIC2.9□□□□□ -1.94
RTL9Q8NET4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.9□□□□□ -1.94
RTL9Q8NET4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.9□□□□□ -1.94
RTL9Q8NET4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RTL9Q8NET4 AC103988.1-201ENST00000566382 2177 ntBASIC2.9□□□□□ -1.95
RTL9Q8NET4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RTL9Q8NET4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms