Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC010975.3-201ENST00000618727 978 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL392088.2-201ENST00000637607 285 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 U6.101-201ENST00000637707 76 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 MIR449B-201ENST00000384995 97 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 SNRPEP2-201ENST00000397592 279 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL136116.1-201ENST00000403591 381 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 RNU4-22P-201ENST00000411058 166 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 LUZP4P1-201ENST00000415420 344 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 RPF2P1-201ENST00000424137 906 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 SGO1P2-201ENST00000429458 1589 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 Z73417.1-201ENST00000447373 778 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 PDSS1P2-201ENST00000449397 678 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 RPL23AP31-201ENST00000456160 467 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC092754.2-201ENST00000463506 460 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 ST13P14-201ENST00000474095 734 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC017015.1-201ENST00000477387 286 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 FCF1P3-201ENST00000496394 590 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC107982.1-201ENST00000507171 1300 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC110768.1-201ENST00000509222 400 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 RNU6-311P-201ENST00000516224 102 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 RN7SKP287-201ENST00000516546 266 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 LARP7P2-201ENST00000575306 125 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 MIR3912-201ENST00000577566 105 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 FAM60BP-201ENST00000578364 658 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 U3.45-201ENST00000607547 219 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL390240.1-201ENST00000612950 384 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AC015967.1-201ENST00000619893 476 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AL136164.4-201ENST00000625013 2135 ntBASIC3.57□□□□□ -1.84
RTL3Q8N8U3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL3Q8N8U3 AP005901.5-201ENST00000545779 1796 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL591034.1-201ENST00000407447 340 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 YPEL5P1-201ENST00000419731 367 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC079780.1-201ENST00000428259 207 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 GTF2IP7-202ENST00000436677 309 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 HMGN2P20-201ENST00000437531 273 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 MTCYBP11-201ENST00000447254 1109 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTL3Q8N8U3 RFC5P1-201ENST00000454419 874 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC092155.2-201ENST00000454675 477 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC025518.1-201ENST00000479856 347 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AC012181.1-201ENST00000479895 423 ntBASIC3.56□□□□□ -1.84
RTL3Q8N8U3 AP000563.1-201ENST00000490865 758 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms