Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-202P-201ENST00000515998 96 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 AC034114.1-201ENST00000520293 285 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 MRPS18CP4-201ENST00000535821 231 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 U2.17-201ENST00000611454 95 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 AC245517.5-201ENST00000611529 162 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 MIR1244-1-201ENST00000612829 85 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 AC005520.5-201ENST00000613926 164 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 MIR1244-3-201ENST00000635744 85 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 U6.106-201ENST00000636360 105 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 MIR1244-2-201ENST00000636449 85 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 MIR1244-4-202ENST00000636813 85 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 AC087516.1-201ENST00000561236 2428 ntBASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NPAS3Q8IXF0 LINC01963-201ENST00000562038 3148 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RNA5SP205-201ENST00000364653 136 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RNU6-708P-201ENST00000384217 107 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC005042.1-201ENST00000393397 800 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL645927.1-201ENST00000396783 406 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RPL23AP17-201ENST00000401064 499 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL359643.1-201ENST00000404109 423 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL121835.1-201ENST00000404250 354 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL445189.1-201ENST00000405722 338 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RPL30P2-201ENST00000414021 291 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC087884.1-201ENST00000469738 328 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL035690.1-201ENST00000490892 383 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC074133.1-201ENST00000515696 183 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 SNORA14.1-201ENST00000516113 141 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC008083.2-201ENST00000546707 476 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC126615.2-201ENST00000553003 515 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC090115.3-201ENST00000553218 849 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL049779.2-201ENST00000553847 315 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RPL7P50-201ENST00000600588 727 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AL512782.1-201ENST00000603093 364 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 RPSAP73-201ENST00000614820 330 ntBASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.9□□□□□ -1.46
NPAS3Q8IXF0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 AC100821.1-201ENST00000523153 2479 ntBASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 RBBP8P1-201ENST00000449447 1844 ntBASIC5.9□□□□□ -1.47
NPAS3Q8IXF0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC007159.1-201ENST00000566529 4706 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RNA5SP507-201ENST00000363603 121 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 SNORA24.1-201ENST00000384401 135 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 MIR628-201ENST00000385229 95 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RNU1-77P-201ENST00000390868 162 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RNU6-550P-201ENST00000391057 101 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RPS29P13-201ENST00000402041 169 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RNU6-1135P-201ENST00000411083 103 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RPL23AP27-201ENST00000415161 451 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 PSMA2P3-201ENST00000429685 675 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 CYCSP6-201ENST00000434498 302 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC008267.6-201ENST00000441664 139 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC021205.1-201ENST00000468797 348 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RPL7P47-201ENST00000497299 556 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 RN7SKP283-201ENST00000517197 270 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 SULT1C2P1-202ENST00000562418 459 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC011487.3-201ENST00000593607 453 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC012616.1-201ENST00000600294 197 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AL359881.1-201ENST00000602916 267 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 AC006254.2-201ENST00000603259 279 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms