Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC008121.2-201ENST00000614647 523 ntBASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC60Q8IWA6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 Y_RNA.25-201ENST00000362528 102 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AL356968.1-201ENST00000416622 474 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 PTP4A1P5-201ENST00000420305 455 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 RPL23AP82-202ENST00000427528 469 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AL512649.1-201ENST00000428997 581 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 RPL23AP16-201ENST00000441715 421 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 FGF7P5-201ENST00000441829 291 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AL590399.6-201ENST00000446396 307 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC104073.1-201ENST00000451988 151 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 HMGN2P7-201ENST00000456186 273 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AL136126.1-201ENST00000473603 402 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 NCOR1P1-202ENST00000486162 291 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AP001086.1-201ENST00000494882 321 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC068305.1-201ENST00000497406 726 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC078918.1-201ENST00000498515 228 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC005921.1-201ENST00000510589 286 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 EEF1A1P37-201ENST00000522748 715 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 ZNF705CP-201ENST00000530515 889 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 MTATP6P24-201ENST00000576835 677 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 MIR5004-201ENST00000579078 107 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC015917.1-201ENST00000579654 510 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC010928.3-201ENST00000587712 541 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 OR4G1P-201ENST00000588632 938 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AL451074.6-201ENST00000608512 729 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 AC092184.1-201ENST00000625042 715 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 ZNF876P-202ENST00000398732 1485 ntBASIC3.67□□□□□ -1.82
CCDC60Q8IWA6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC017071.1-201ENST00000564407 2204 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RNA5SP374-201ENST00000362939 125 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RNU6-374P-201ENST00000364146 108 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RNA5SP189-201ENST00000364920 115 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RNA5SP229-201ENST00000410809 99 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 HIGD1AP15-201ENST00000416198 280 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 ELOCP9-201ENST00000418624 239 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 ATP5F1P1-201ENST00000433775 569 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 CYCSP32-201ENST00000440548 321 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL591719.1-201ENST00000444669 744 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 NPM1P49-201ENST00000448027 714 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 NECAP1P2-201ENST00000455668 727 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RPL5P24-201ENST00000463742 885 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC116353.3-201ENST00000511215 249 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 NDUFB4P9-201ENST00000511646 388 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RN7SKP31-201ENST00000516354 278 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms