Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC109445.1-201ENST00000512356 383 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 PHBP14-201ENST00000512887 367 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 FABP5P12-201ENST00000515543 389 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 SNORA74D-201ENST00000516404 141 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 RNU4-60P-201ENST00000517239 135 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 MTATP6P24-201ENST00000576835 677 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC009220.3-201ENST00000604318 586 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC093424.1-201ENST00000604999 338 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC069304.2-201ENST00000605154 435 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 RNU1-30P-201ENST00000606575 163 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC092106.3-201ENST00000611308 722 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC008083.4-201ENST00000615076 444 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC231759.1-201ENST00000616455 597 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 AL392088.2-201ENST00000637607 285 ntBASIC3.31□□□□□ -1.88
CCDC71Q8IV32 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC71Q8IV32 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 ZNF37BP-203ENST00000452306 1352 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 RNU6-657P-201ENST00000383904 107 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 MIR1250-201ENST00000408098 113 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC068533.2-201ENST00000411872 306 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 SETP5-201ENST00000437270 562 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AL590399.6-201ENST00000446396 307 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 RPL21P23-201ENST00000446654 460 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 SLC31A1P1-201ENST00000451221 567 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC007967.1-201ENST00000455422 1159 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC010468.1-201ENST00000461022 817 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC078817.1-201ENST00000492623 435 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 DSTNP2-201ENST00000504533 515 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC034244.1-201ENST00000507687 207 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 HMGB1P28-201ENST00000507778 552 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 RN7SKP13-201ENST00000515933 244 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC010198.2-201ENST00000550612 259 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC037471.2-201ENST00000564941 598 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AL158211.1-201ENST00000566763 763 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC080013.3-201ENST00000606839 578 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AC011816.2-201ENST00000607089 556 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AL513477.2-201ENST00000607858 568 ntBASIC3.3□□□□□ -1.88
CCDC71Q8IV32 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC71Q8IV32 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 SNRPEP3-201ENST00000338402 276 ntBASIC3.29□□□□□ -1.88
CCDC71Q8IV32 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 MIR490-201ENST00000384865 128 ntBASIC3.29□□□□□ -1.88
CCDC71Q8IV32 HSPE1P26-201ENST00000405341 275 ntBASIC3.29□□□□□ -1.88
CCDC71Q8IV32 RNA5SP31-201ENST00000411144 127 ntBASIC3.29□□□□□ -1.88
CCDC71Q8IV32 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 AC005517.2-201ENST00000424673 553 ntBASIC3.29□□□□□ -1.88
CCDC71Q8IV32 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 MTCO2P20-201ENST00000437339 673 ntBASIC3.29□□□□□ -1.88
CCDC71Q8IV32 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC71Q8IV32 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms