Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.7□□□□□ -1.5
USP48Q86UV5 RPS20P24-201ENST00000457473 361 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 COX7A2P2-201ENST00000505291 250 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 AC020593.1-201ENST00000507399 299 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 MTND1P35-201ENST00000526739 508 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.7□□□□□ -1.5
USP48Q86UV5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.7□□□□□ -1.5
USP48Q86UV5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.7□□□□□ -1.5
USP48Q86UV5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.7□□□□□ -1.5
USP48Q86UV5 AC087477.6-201ENST00000559595 843 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 MIR3167-201ENST00000579623 85 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 AC008752.3-201ENST00000588113 712 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.7□□□□□ -1.5
USP48Q86UV5 AL391813.2-201ENST00000609113 322 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.7□□□□□ -1.5
USP48Q86UV5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP48Q86UV5 MIR4496-201ENST00000635896 61 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.7□□□□□ -1.5
USP48Q86UV5 AL354685.2-201ENST00000448218 1447 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP48Q86UV5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP48Q86UV5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.7□□□□□ -1.5
USP48Q86UV5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP48Q86UV5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.7□□□□□ -1.5
USP48Q86UV5 AC025031.4-201ENST00000621248 3271 ntBASIC5.7□□□□□ -1.5
USP48Q86UV5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
USP48Q86UV5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.69□□□□□ -1.5
USP48Q86UV5 RNY1P12-201ENST00000364251 105 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 RNU6-877P-201ENST00000383868 107 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 RNU6-483P-201ENST00000384088 108 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 U3.29-201ENST00000391296 212 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 GNG5P5-201ENST00000420444 220 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AC006548.1-201ENST00000427470 102 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 HMGB3P21-201ENST00000452483 547 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.69□□□□□ -1.5
USP48Q86UV5 RN7SL517P-201ENST00000462240 305 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AC055855.1-201ENST00000489563 579 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 MTCO3P44-201ENST00000510977 541 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AC005798.1-201ENST00000513715 387 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AP003497.1-201ENST00000528472 562 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 RAB11AP2-201ENST00000545905 639 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.69□□□□□ -1.5
USP48Q86UV5 MIR5699-201ENST00000578903 90 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AL117336.2-201ENST00000602435 335 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AL121932.1-201ENST00000605542 214 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.69□□□□□ -1.5
USP48Q86UV5 CR381572.1-201ENST00000625098 102 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 AC099654.5-201ENST00000636479 350 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 DHX9P1-201ENST00000436565 3076 ntBASIC5.69□□□□□ -1.5
USP48Q86UV5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP48Q86UV5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
USP48Q86UV5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP48Q86UV5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.68□□□□□ -1.5
USP48Q86UV5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
USP48Q86UV5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP48Q86UV5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP48Q86UV5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
USP48Q86UV5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP48Q86UV5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP48Q86UV5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
USP48Q86UV5 RNY4P16-201ENST00000364768 94 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 RNU6-456P-201ENST00000384493 107 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 RNU1-82P-201ENST00000390851 165 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC009237.5-201ENST00000414271 501 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AC127526.1-201ENST00000417526 366 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 MTND1P14-201ENST00000427400 950 ntBASIC5.68□□□□□ -1.5
USP48Q86UV5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.68□□□□□ -1.5
USP48Q86UV5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP48Q86UV5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms