Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RAC1P8-201ENST00000427086 527 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC011742.1-201ENST00000431448 434 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 MTND4LP10-201ENST00000435146 291 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC069528.1-202ENST00000482888 637 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 RPL7P24-201ENST00000493052 752 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 RN7SKP298-201ENST00000515950 94 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 RN7SKP40-201ENST00000517211 242 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 HIGD1AP18-201ENST00000520730 278 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AP000619.3-201ENST00000535634 1127 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC007954.1-201ENST00000554198 494 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC008269.2-201ENST00000561915 1105 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC120057.2-201ENST00000571520 271 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC100830.2-201ENST00000581636 240 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 MIR3149-201ENST00000584629 83 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC079228.1-201ENST00000624774 1049 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 AC025048.6-202ENST00000627667 438 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 ZNF37BP-203ENST00000452306 1352 ntBASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BHLHA9Q7RTU4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC016588.2-201ENST00000632484 3021 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RNU6-1309P-201ENST00000363305 108 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RNU6-236P-201ENST00000363886 106 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 Y_RNA.402-201ENST00000383972 102 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RPS24P12-201ENST00000402084 394 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AL356432.1-201ENST00000405809 419 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AL034374.1-201ENST00000406329 351 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AL009174.1-201ENST00000426577 416 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RPS29P7-201ENST00000439662 171 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 GAPDHP17-201ENST00000449858 1001 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC244505.3-201ENST00000454598 187 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RN7SL809P-201ENST00000482040 297 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RPL39P36-201ENST00000490784 156 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC008837.1-201ENST00000511513 412 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 RNU6-277P-201ENST00000516272 106 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 HMGB1P19-201ENST00000517578 577 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 NOP56P3-201ENST00000549457 385 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC006960.3-201ENST00000561845 705 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 BNIP3P5-201ENST00000562290 498 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC107954.1-201ENST00000565906 727 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC113194.1-201ENST00000606037 500 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC138649.3-201ENST00000622154 254 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 AC134503.1-201ENST00000633048 54 ntBASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
BHLHA9Q7RTU4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
BHLHA9Q7RTU4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
BHLHA9Q7RTU4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BHLHA9Q7RTU4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BHLHA9Q7RTU4 ZNF734P-201ENST00000419494 1534 ntBASIC4.11□□□□□ -1.75
BHLHA9Q7RTU4 ZNF962P-201ENST00000443465 3140 ntBASIC4.11□□□□□ -1.75
BHLHA9Q7RTU4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms