Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AC099489.2-201ENST00000574976 260 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 SNORA51-201ENST00000606420 132 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AL133173.2-201ENST00000614270 90 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AL122125.1-201ENST00000616999 600 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AL732618.1-201ENST00000623251 301 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 LRRC77P-213ENST00000637727 880 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AC099654.14-201ENST00000638599 341 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AC005005.4-201ENST00000623789 16698 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 AC024560.2-201ENST00000507981 1497 ntBASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
OTOP1Q7RTM1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 FRG1BP-201ENST00000278882 761 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 RNA5SP119-201ENST00000362715 117 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 RNVU1-3-201ENST00000364313 161 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 RNU6-730P-201ENST00000383954 104 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 CALM2P3-201ENST00000400429 449 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC097374.1-203ENST00000400783 485 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AL359704.1-201ENST00000411586 781 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 RPS15AP40-201ENST00000419621 391 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC002553.2-201ENST00000453217 340 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 TRMT10BP1-201ENST00000519377 943 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AL121579.1-201ENST00000555129 305 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 HSPE1P5-201ENST00000561489 272 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AP005205.1-201ENST00000563503 508 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC090615.1-201ENST00000577519 154 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 MIR3200-201ENST00000580767 85 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC012417.1-201ENST00000582307 1039 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC091178.1-203ENST00000584586 279 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 HMGB2P1-201ENST00000591146 634 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AL161729.3-201ENST00000603533 673 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AC011451.2-201ENST00000604303 598 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 MIR98-201ENST00000606724 119 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 AP001005.3-201ENST00000622049 129 ntBASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
OTOP1Q7RTM1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AC006971.1-201ENST00000407916 4486 ntBASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AL353777.1-201ENST00000425552 326 ntBASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 PSMA6P3-201ENST00000428242 164 ntBASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 CEACAMP1-201ENST00000434624 1035 ntBASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 USP9YP15-201ENST00000442391 422 ntBASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 RPS4XP4-201ENST00000443195 763 ntBASIC5.04□□□□□ -1.6
OTOP1Q7RTM1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms