Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SHFQ7M4L6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.72□□□□□ -1.81
SHFQ7M4L6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.72□□□□□ -1.81
SHFQ7M4L6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SHFQ7M4L6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC090229.1-201ENST00000590983 1609 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 Y_RNA.41-201ENST00000362646 102 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RNA5SP258-201ENST00000362750 119 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC136624.1-201ENST00000400791 413 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RNA5SP56-201ENST00000410277 118 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 Y_RNA.619-201ENST00000410951 90 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 FAR2P2-201ENST00000413041 594 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AIMP1P1-201ENST00000418670 937 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 OR5BE1P-201ENST00000425977 939 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RPL23AP1-201ENST00000428990 471 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC087650.1-201ENST00000431445 468 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC011742.1-201ENST00000431448 434 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 PGBD4P3-201ENST00000440731 581 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 NDUFS5P3-201ENST00000450668 321 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AL353691.1-201ENST00000451332 387 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AL033528.1-201ENST00000453780 140 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 MTCYBP1-201ENST00000454315 1119 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RPL36AP13-201ENST00000457490 317 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RPL21P103-201ENST00000479921 488 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 LARP1BP2-201ENST00000486594 519 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC069499.1-201ENST00000489433 509 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC112204.1-201ENST00000502591 103 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AK3P4-201ENST00000504283 583 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC109464.2-201ENST00000510242 943 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 RNA5SP519-201ENST00000516480 119 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 RPL23AP87-202ENST00000573039 466 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC009977.1-201ENST00000586015 570 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AL669831.4-202ENST00000590817 238 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 RPL12P25-202ENST00000598100 674 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AL021997.1-201ENST00000605757 193 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC098614.4-201ENST00000607601 462 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC087241.4-201ENST00000612441 480 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 AC068792.1-201ENST00000621354 417 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 OR5BE1P-202ENST00000641168 1176 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 NMD3P1-201ENST00000439704 1488 ntBASIC3.71□□□□□ -1.82
SHFQ7M4L6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHFQ7M4L6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.71□□□□□ -1.82
SHFQ7M4L6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHFQ7M4L6 Y_RNA.3-201ENST00000362331 103 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RNY4P24-201ENST00000362735 96 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RNU1-14P-201ENST00000362759 152 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RNU6-263P-201ENST00000363811 107 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 SNORD51-201ENST00000384320 80 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 SNORD115.1-201ENST00000391109 76 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 MIR1250-201ENST00000408098 113 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RN7SKP235-201ENST00000410662 305 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.7□□□□□ -1.82
SHFQ7M4L6 AC119751.6-201ENST00000416712 186 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 AC010975.2-201ENST00000427781 588 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 BX890604.2-201ENST00000427883 474 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RPS27AP12-201ENST00000429552 465 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.7□□□□□ -1.82
SHFQ7M4L6 CKS1BP5-201ENST00000434172 273 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHFQ7M4L6 USP9YP28-201ENST00000435142 589 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 SKP1P1-201ENST00000438081 489 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 MTND1P34-201ENST00000438556 671 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 AC244505.5-201ENST00000443639 207 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.7□□□□□ -1.82
SHFQ7M4L6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.7□□□□□ -1.82
SHFQ7M4L6 snoU13.8-201ENST00000458890 104 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RN7SL610P-201ENST00000463845 291 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 RPL35P6-201ENST00000490024 372 ntBASIC3.7□□□□□ -1.82
SHFQ7M4L6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.7□□□□□ -1.82
SHFQ7M4L6 COX7A2P2-201ENST00000505291 250 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms