Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RPL23AP57-201ENST00000332361 466 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 RNU1-64P-201ENST00000365443 163 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 TPMTP2-201ENST00000414372 726 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC092832.1-201ENST00000422934 400 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 OR6C5P-201ENST00000452388 923 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC099563.1-201ENST00000456086 418 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 RN7SKP83-201ENST00000516512 178 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC244505.7-201ENST00000599675 272 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 WISP1-OT1-201ENST00000602893 642 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC105129.3-201ENST00000605455 485 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 AC244205.2-202ENST00000635781 342 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SYNE3Q6ZMZ3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 RNA5SP88-201ENST00000365560 109 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 SNORD116-9-201ENST00000384000 95 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 SNORD116-3-201ENST00000384287 95 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 SNORD116-7-201ENST00000384404 95 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 SNORD116-5-201ENST00000384462 95 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 DHFRP6-201ENST00000401776 268 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL445189.1-201ENST00000405722 338 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 RN7SKP159-201ENST00000410657 292 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 RPS15AP38-201ENST00000413110 372 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 HMGB3P20-201ENST00000417997 600 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 MTCYBP24-201ENST00000420387 1106 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 RPL21P109-201ENST00000422213 475 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 CEACAMP4-201ENST00000457676 421 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 UBDP1-202ENST00000457888 382 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL672167.3-201ENST00000465951 960 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC022034.3-201ENST00000471393 478 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC012170.1-201ENST00000495139 359 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 RPL7P47-201ENST00000497299 556 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 HMGN1P11-201ENST00000508668 303 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC026412.2-201ENST00000512270 1075 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 OR4G1P-201ENST00000588632 938 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL031985.2-201ENST00000600955 480 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 YWHAQP7-201ENST00000603536 658 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 BNIP3P11-201ENST00000603878 563 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL513477.2-201ENST00000607858 568 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AL159169.3-201ENST00000608871 561 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC127502.3-201ENST00000636170 1206 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 AC021755.1-201ENST00000559747 1447 ntBASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SYNE3Q6ZMZ3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.72
SYNE3Q6ZMZ3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SYNE3Q6ZMZ3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.34□□□□□ -1.72
SYNE3Q6ZMZ3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC010733.2-201ENST00000589496 5702 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 ZNF734P-201ENST00000419494 1534 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 RNU6-920P-201ENST00000410926 92 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL159169.1-201ENST00000421119 127 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL512649.1-201ENST00000428997 581 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 EZH2P1-201ENST00000431167 291 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 MTND4P32-201ENST00000437189 1237 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms