Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AL034351.1-201ENST00000605288 668 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC068944.2-201ENST00000610373 403 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC243312.2-201ENST00000623340 601 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC099494.2-201ENST00000623371 978 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC008725.1-201ENST00000605123 2263 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88Q6PEY1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 OR4G2P-201ENST00000328113 903 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC007685.1-201ENST00000329806 452 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNU1-43P-201ENST00000365052 165 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNU4-12P-201ENST00000365233 139 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 SNORA67-201ENST00000384423 137 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNU6-456P-201ENST00000384493 107 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNU6-780P-201ENST00000391030 104 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RPS3AP24-201ENST00000407896 734 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNU2-43P-201ENST00000410306 190 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC068287.1-201ENST00000430283 295 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RPL23AP30-201ENST00000432419 501 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC004866.2-201ENST00000438285 481 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC132479.1-201ENST00000449160 144 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 PSPHP1-201ENST00000450062 261 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RPS17P2-201ENST00000461663 408 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AL049714.1-201ENST00000466686 347 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RPS26P15-201ENST00000488067 348 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC068305.1-201ENST00000497406 726 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 HMGB1P29-201ENST00000505659 499 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC008638.1-201ENST00000506035 866 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC006499.6-201ENST00000511169 607 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNA5SP92-201ENST00000516437 110 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 RNU6-64P-201ENST00000517119 105 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 TOMM20P2-201ENST00000540082 421 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC051619.2-201ENST00000559063 397 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC016180.1-201ENST00000567945 403 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 CYP4A43P-201ENST00000568156 121 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC007448.1-201ENST00000582714 234 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 OR7E18P-201ENST00000592589 702 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC067959.1-201ENST00000604334 379 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AL022099.1-201ENST00000604551 712 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 MEMO1P5-201ENST00000604810 406 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 Z84480.1-201ENST00000605131 311 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC008277.2-201ENST00000605196 797 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC073534.2-201ENST00000620377 381 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AL161637.1-201ENST00000622380 412 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM88Q6PEY1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 AC010928.1-201ENST00000592477 1447 ntBASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 OR4K15-201ENST00000305051 1216 ntBASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 RNU6-335P-201ENST00000364563 113 ntBASIC3.78□□□□□ -1.8
TMEM88Q6PEY1 RNU6-169P-201ENST00000365336 107 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms