Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC114801.2-201ENST00000503825 781 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 DEFB109D-201ENST00000529497 240 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AP006289.1-201ENST00000538089 277 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC135001.1-201ENST00000544546 283 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 SNORD39.2-201ENST00000579995 76 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC011477.5-201ENST00000586571 259 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC068790.4-201ENST00000602474 263 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AL512782.1-201ENST00000603093 364 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC008814.1-201ENST00000603797 406 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AL162431.4-201ENST00000604674 411 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC244107.2-201ENST00000611773 76 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 ATP5A1P2-202ENST00000616464 443 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AC244100.1-202ENST00000621554 382 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 U6.104-201ENST00000637979 90 ntBASIC6.63□□□□□ -1.35
RC3H1Q5TC82 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.63□□□□□ -1.35
RC3H1Q5TC82 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.270-201ENST00000364693 104 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 RNA5SP505-201ENST00000364748 108 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 SNORA62-201ENST00000365493 153 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 RNY3P13-201ENST00000365542 102 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.376-201ENST00000365638 108 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 RNU6-1093P-201ENST00000391194 107 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 RPS16P5-201ENST00000406501 404 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.594-201ENST00000410373 140 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC236972.1-201ENST00000433225 199 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC010881.1-201ENST00000433830 235 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AL359265.2-201ENST00000434367 631 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 TIMM9P1-201ENST00000436122 256 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC112498.1-201ENST00000444401 332 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC073910.1-201ENST00000445047 438 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC073264.2-201ENST00000448886 166 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 HMGN3P1-201ENST00000453847 193 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC007967.1-201ENST00000455422 1159 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC103987.1-201ENST00000473394 348 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 HMGB1P35-201ENST00000503360 598 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC022493.2-201ENST00000506122 481 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 HIGD1AP13-201ENST00000509878 289 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 RNU6-111P-201ENST00000517179 105 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 MIR3133-201ENST00000583157 78 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 uc_338.7-201ENST00000621834 124 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 AL355488.2-201ENST00000609909 2850 ntBASIC6.62□□□□□ -1.35
RC3H1Q5TC82 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
RC3H1Q5TC82 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 SOCS5P3-201ENST00000425115 1576 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 SAMMSON-213ENST00000641336 1521 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 DHX40P1-201ENST00000588725 1412 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC126755.2-208ENST00000327792 462 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC138969.1-213ENST00000331436 462 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.39-201ENST00000362620 98 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 Y_RNA.473-201ENST00000384333 102 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 EIF5P1-201ENST00000400019 1231 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 SNORA11-201ENST00000408789 128 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 RN7SKP222-201ENST00000410651 315 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 E2F6P2-201ENST00000420708 748 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AL034379.1-201ENST00000423216 253 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AC016712.1-201ENST00000431088 378 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 RPL23AP74-201ENST00000437246 471 ntBASIC6.61□□□□□ -1.35
RC3H1Q5TC82 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.61□□□□□ -1.35
RC3H1Q5TC82 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms